RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 MMABQ96EY8 250 aaPredicted RBP26.83■■□□□ 1.89
SSBP4-206ENST00000599699 WDR54Q9H977 334 aa26.83■■□□□ 1.89
SSBP4-206ENST00000599699 IGSF5Q9NSI5 407 aa26.83■■□□□ 1.89
SSBP4-206ENST00000599699 A0A096LPK6 155 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 PRPF4O43172 522 aaKnown RBP eCLIP26.82■■□□□ 1.88
SSBP4-206ENST00000599699 RFPL1O75677 317 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 SLC6A12P48065 614 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 IRF9Q00978 393 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 OCA2Q04671 838 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 ATP1A4Q13733 1029 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 NKG7Q16617 165 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 FAM83EQ2M2I3 478 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 FBXO48Q5FWF7 155 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 NXPE4Q6UWF7 544 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 SHISA6Q6ZSJ9 500 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 SLC13A3Q8WWT9 602 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 VPS11Q9H270 941 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 SLC26A1Q9H2B4 701 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 SOX17Q9H6I2 414 aaPredicted RBP26.82■■□□□ 1.88
SSBP4-206ENST00000599699 PELI2Q9HAT8 420 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 ZNF282Q9UDV7 671 aaPredicted RBP26.82■■□□□ 1.88
SSBP4-206ENST00000599699 TUBD1Q9UJT1 453 aa26.82■■□□□ 1.88
SSBP4-206ENST00000599699 NXT1Q9UKK6 140 aaKnown RBP26.82■■□□□ 1.88
SSBP4-206ENST00000599699 SMG1Q96Q15 3661 aaKnown RBP26.82■■□□□ 1.88
SSBP4-206ENST00000599699 A0A0A6YYC8 382 aaPredicted RBP26.81■■□□□ 1.88
SSBP4-206ENST00000599699 EXOC1LA0A1B0GW35 172 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 TRBC2A0A5B9 178 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 SUPT3HB4E1H0 165 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 I3L1I5 382 aaPredicted RBP26.81■■□□□ 1.88
SSBP4-206ENST00000599699 SUPT3HO75486 399 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 C1QL1O75973 258 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 IPO13O94829 963 aaKnown RBP26.81■■□□□ 1.88
SSBP4-206ENST00000599699 SERPIND1P05546 499 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 FAM153BP0C7A2 387 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 SLC35G6P0C7Q6 338 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 C19orf57Q0VDD7 668 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 CHAF1BQ13112 559 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 FAM153CQ494X1 144 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 CPZQ66K79 652 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 ISCA2Q86U28 154 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 ZNF843Q8N446 348 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 ZNF740Q8NDX6 193 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 IP6K3Q96PC2 410 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 AIF1LQ9BQI0 150 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 ING2Q9H160 280 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 ACSS2Q9NR19 701 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 TRPC4Q9UBN4 977 aa26.81■■□□□ 1.88
SSBP4-206ENST00000599699 MDC1Q14676 2089 aaKnown RBP26.8■■□□□ 1.88
SSBP4-206ENST00000599699 MKRN2OSH3BPM6 223 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 PEX12O00623 359 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 TAPBPO15533 448 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 KRT38O76015 456 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 ALDOAP04075 364 aaKnown RBP26.8■■□□□ 1.88
SSBP4-206ENST00000599699 UMODP07911 640 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 GNAZP19086 355 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 AVPR1BP47901 424 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 GLRBP48167 497 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 KCNC1P48547 511 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 HSPA7P48741 367 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 NFATC3Q12968 1075 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 DSG2Q14126 1118 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 FAM53BQ14153 422 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 MRGPREQ86SM8 312 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 APLFQ8IW19 511 aaPredicted RBP26.8■■□□□ 1.88
SSBP4-206ENST00000599699 TMEM151BQ8IW70 566 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 GSPT2Q8IYD1 628 aaKnown RBP26.8■■□□□ 1.88
SSBP4-206ENST00000599699 KLHDC8AQ8IYD2 350 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 PRSS58Q8IYP2 241 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 CENPLQ8N0S6 344 aaPredicted RBP26.8■■□□□ 1.88
SSBP4-206ENST00000599699 ARHGEF39Q8N4T4 335 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 SNX31Q8N9S9 440 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 PDPRQ8NCN5 879 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 C9orf43Q8TAL5 461 aaPredicted RBP26.8■■□□□ 1.88
SSBP4-206ENST00000599699 ZCCHC10Q8TBK6 192 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 ESAMQ96AP7 390 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 TMEM79Q9BSE2 394 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 SLC25A18Q9H1K4 315 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 DNAJC11Q9NVH1 559 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 NUDT4Q9NZJ9 180 aa26.8■■□□□ 1.88
SSBP4-206ENST00000599699 MRPS2Q9Y399 296 aaKnown RBP26.8■■□□□ 1.88
SSBP4-206ENST00000599699 NDUFS4O43181 175 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 KERAO60938 352 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 H2AFYO75367 372 aaKnown RBP26.79■■□□□ 1.88
SSBP4-206ENST00000599699 STK16O75716 305 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 DNAJB5O75953 348 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 ABHD2P08910 425 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 GGT5P36269 586 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 REEP5Q00765 189 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 CDC16Q13042 620 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 RBBP5Q15291 538 aaKnown RBP26.79■■□□□ 1.88
SSBP4-206ENST00000599699 KLC3Q6P597 504 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 MIEF2Q96C03 454 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 TM4SF19Q96DZ7 209 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 ABHD17AQ96GS6 310 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 SPSB2Q99619 263 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 CAPS2Q9BXY5 557 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 TRIM55Q9BYV6 548 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 SPNS1Q9H2V7 528 aa26.79■■□□□ 1.88
SSBP4-206ENST00000599699 PTBP2Q9UKA9 531 aaKnown RBP26.79■■□□□ 1.88
SSBP4-206ENST00000599699 UBXN8O00124 270 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms