RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SCN1BQ07699 218 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 SPOCK1Q08629 439 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 DLG2Q15700 870 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 SPDYCQ5MJ68 293 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 C19orf48Q6RUI8 117 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 Q6ZTC4 211 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 ZNF534Q76KX8 674 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 SCML4Q8N228 414 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 CIARTQ8N365 385 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 RTL3Q8N8U3 475 aaKnown RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 POGLUT1Q8NBL1 392 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 SGF29Q96ES7 293 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 NRBF2Q96F24 287 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 IQCGQ9H095 443 aaKnown RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 ABCG8Q9H221 673 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 CRLF2Q9HC73 371 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 SDF2L1Q9HCN8 221 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 ATAD3AQ9NVI7 634 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 DDX43Q9NXZ2 648 aaKnown RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 DNAJB9Q9UBS3 223 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 EXO1Q9UQ84 846 aaKnown RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 ACEP12821 1306 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 RNF123Q5XPI4 1314 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 CENPJQ9HC77 1338 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 KIAA0100Q14667 2235 aaKnown RBP4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CTAGE15A4D2H0 777 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 H0YIV9 168 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 NMT2O60551 498 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 PDE9AO76083 593 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CAVIN2O95810 425 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 IGHV4-39P01824 125 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 TFAP2AP05549 437 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 LIPFP07098 398 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 PRSS1P07477 247 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CTAGE8P0CG41 777 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 MMP9P14780 707 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 SAT1P21673 171 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 EPS15P42566 896 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CASP3P42574 277 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 GABPB1Q06547 395 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-216ENST00000593223 RIPK1Q13546 671 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 NTRK2Q16620 822 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 C9orf152Q5JTZ5 239 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 NDUFAF5Q5TEU4 345 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 ADALQ6DHV7 355 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CAVIN1Q6NZI2 390 aaKnown RBP4.6□□□□□ -1.67
SMAD4-216ENST00000593223 TRAT1Q6PIZ9 186 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 PACS1Q6VY07 963 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 USP43Q70EL4 1123 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 PIWIL4Q7Z3Z4 852 aaKnown RBP4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CTAGE6Q86UF2 777 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 MCEMP1Q8IX19 187 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CTAGE4Q8IX94 777 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 RBM15BQ8NDT2 890 aaKnown RBP4.6□□□□□ -1.67
SMAD4-216ENST00000593223 ALG14Q96F25 216 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 ST6GAL2Q96JF0 529 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 ZNF354BQ96LW1 612 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 DENND2DQ9H6A0 471 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-216ENST00000593223 OPA3Q9H6K4 179 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 VCPKMTQ9H867 229 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 FANCEQ9HB96 536 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CHMP1AQ9HD42 196 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-216ENST00000593223 SLC35D1Q9NTN3 355 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 ARHGEF38Q9NXL2 777 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 TAS2R14Q9NYV8 317 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 NINJ2Q9NZG7 142 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 DNAJB4Q9UDY4 337 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CPSF3Q9UKF6 684 aaKnown RBP4.6□□□□□ -1.67
SMAD4-216ENST00000593223 POMT1Q9Y6A1 747 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 ZNF541Q9H0D2 1346 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 PALLDQ8WX93 1383 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 DOT1LQ8TEK3 1739 aa4.6□□□□□ -1.67
SMAD4-216ENST00000593223 CHD8Q9HCK8 2581 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 HTTP42858 3142 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 TRAV34A0A0B4J273 112 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 A0A0G2JNG1 304 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 OR2M5A3KFT3 312 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 RNF113AO15541 343 aaKnown RBP4.59□□□□□ -1.67
SMAD4-216ENST00000593223 NDUFS4O43181 175 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 ATP8B3O60423 1300 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 CTSVO60911 334 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 NUP155O75694 1391 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 BCAS2O75934 225 aaPredicted RBP4.59□□□□□ -1.67
SMAD4-216ENST00000593223 GCNT3O95395 438 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 IFNB1P01574 187 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 TPOP07202 933 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 TPM1P09493 284 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 CCNA2P20248 432 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 PTAFRP25105 342 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 NMBRP28336 390 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 GDI1P31150 447 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 HOXC8P31273 242 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 SNRPEP62304 92 aaKnown RBP4.59□□□□□ -1.67
SMAD4-216ENST00000593223 ITGA7Q13683 1181 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 KIR2DS5Q14953 304 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 STK11Q15831 433 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 DUOXA1Q1HG43 343 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 AADACL4Q5VUY2 407 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 AP1ARQ63HQ0 302 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 PM20D1Q6GTS8 502 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms