RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 TM4SF19Q96DZ7 209 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 PWWP2AQ96N64 755 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 WDR83Q9BRX9 315 aaKnown RBP17.05■□□□□ 0.32
H3F3B-209ENST00000589949 FAM167BQ9BTA0 163 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 CCDC177Q9NQR7 707 aaPredicted RBP17.05■□□□□ 0.32
H3F3B-209ENST00000589949 UTP6Q9NYH9 597 aaKnown RBP17.05■□□□□ 0.32
H3F3B-209ENST00000589949 OSGIN2Q9Y236 505 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 KCNE1BA0A087WTH5 132 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 EIF3FO00303 357 aaPredicted RBP17.04■□□□□ 0.32
H3F3B-209ENST00000589949 PRPF4O43172 522 aaKnown RBP eCLIP17.04■□□□□ 0.322e-7■■□□□ 13.3
H3F3B-209ENST00000589949 LRRTM2O43300 516 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 IL1RNP18510 177 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 CXCR2P25025 360 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 ARG2P78540 354 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 NAE1Q13564 534 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 TMEM214Q6NUQ4 689 aaKnown RBP17.04■□□□□ 0.32
H3F3B-209ENST00000589949 RPUSD3Q6P087 351 aaKnown RBP17.04■□□□□ 0.32
H3F3B-209ENST00000589949 AGTRAPQ6RW13 159 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 KCT2Q8NC54 265 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 EBNA1BP2Q99848 306 aaKnown RBP17.04■□□□□ 0.32
H3F3B-209ENST00000589949 SGPP1Q9BX95 441 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 DDX47Q9H0S4 455 aaKnown RBP17.04■□□□□ 0.32
H3F3B-209ENST00000589949 HCN3Q9P1Z3 774 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 TRMT6Q9UJA5 497 aaKnown RBP17.04■□□□□ 0.32
H3F3B-209ENST00000589949 IKZF3Q9UKT9 509 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 SNX12Q9UMY4 172 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 SVILO95425 2214 aa17.04■□□□□ 0.32
H3F3B-209ENST00000589949 CPAMD8Q8IZJ3 1885 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 SCN3AQ9NY46 2000 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 SGK494L7N484 410 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 TXNDC9O14530 226 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 DNALI1O14645 258 aaPredicted RBP17.03■□□□□ 0.32
H3F3B-209ENST00000589949 DNAJB6O75190 326 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 WISP2O76076 250 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 WDPCPO95876 746 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 EDN3P14138 238 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 NPPBP16860 134 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 TDGF1P3P51864 188 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 HP1BP3Q5SSJ5 553 aaPredicted RBP17.03■□□□□ 0.32
H3F3B-209ENST00000589949 CNTN4Q8IWV2 1026 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 MCOLN3Q8TDD5 553 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 HAS2Q92819 552 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 ALKBH8Q96BT7 664 aaKnown RBP17.03■□□□□ 0.32
H3F3B-209ENST00000589949 TRIM44Q96DX7 344 aaPredicted RBP17.03■□□□□ 0.32
H3F3B-209ENST00000589949 MOCOSQ96EN8 888 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 LINGO1Q96FE5 620 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 CYTH2Q99418 400 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 NAP1L3Q99457 506 aaPredicted RBP17.03■□□□□ 0.32
H3F3B-209ENST00000589949 PARVBQ9HBI1 364 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 RIC8BQ9NVN3 520 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 ZGRF1Q86YA3 2104 aa17.03■□□□□ 0.32
H3F3B-209ENST00000589949 CACNA1DQ01668 2161 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 H0YIG0 161 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 NRDCO43847 1150 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 SEC24DO94855 1032 aaPredicted RBP17.02■□□□□ 0.32
H3F3B-209ENST00000589949 NSA2O95478 260 aaKnown RBP17.02■□□□□ 0.32
H3F3B-209ENST00000589949 C8GP07360 202 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 C8orf89P0DMQ9 161 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 CDH1P12830 882 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 FDXRP22570 491 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 RPS15AP62244 130 aaKnown RBP17.02■□□□□ 0.32
H3F3B-209ENST00000589949 PTK6Q13882 451 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 PPP1R7Q15435 360 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 NDUFA9Q16795 377 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 TRMT10BQ6PF06 316 aaKnown RBP17.02■□□□□ 0.32
H3F3B-209ENST00000589949 FAM180AQ6UWF9 173 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 RIPOR1Q6ZS17 1223 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 SLC26A11Q86WA9 606 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 OR51Q1Q8NH59 317 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 ZCCHC10Q8TBK6 192 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 PYCR2Q96C36 320 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 OR4K3Q96R72 315 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 KCNF1Q9H3M0 494 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 OLAHQ9NV23 265 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 TAS2R13Q9NYV9 303 aa17.02■□□□□ 0.32
H3F3B-209ENST00000589949 DYTNA2CJ06 578 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 CTAGE15A4D2H0 777 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 WFS1O76024 890 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 B3GALT4O96024 378 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 HRH2P25021 359 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 XCR1P46094 333 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 AVPR1BP47901 424 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 ST13P50502 369 aaKnown RBP17.01■□□□□ 0.31
H3F3B-209ENST00000589949 KCNK10P57789 538 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 MEF2AQ02078 507 aaPredicted RBP17.01■□□□□ 0.31
H3F3B-209ENST00000589949 BBS9Q3SYG4 887 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 TEDDM1Q5T9Z0 273 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 HIBCHQ6NVY1 386 aaPredicted RBP17.01■□□□□ 0.31
H3F3B-209ENST00000589949 CTAGE6Q86UF2 777 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 GRK7Q8WTQ7 553 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 MAGEB10Q96LZ2 347 aaPredicted RBP17.01■□□□□ 0.31
H3F3B-209ENST00000589949 OLFM1Q99784 485 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 SPNS1Q9H2V7 528 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
H3F3B-209ENST00000589949 ASIC3Q9UHC3 531 aa17.01■□□□□ 0.31
H3F3B-209ENST00000589949 DIDO1Q9BTC0 2240 aaKnown RBP17■□□□□ 0.31
H3F3B-209ENST00000589949 TRAV17A0A0B4J275 112 aa17■□□□□ 0.31
H3F3B-209ENST00000589949 ZNF860A6NHJ4 632 aa17■□□□□ 0.31
H3F3B-209ENST00000589949 PCDH17O14917 1159 aa17■□□□□ 0.31
H3F3B-209ENST00000589949 SLC16A5O15375 505 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 834.7 ms