RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NETO1Q8TDF5 533 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 BTN2A2Q8WVV5 523 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 GAB3Q8WWW8 586 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SNX19Q92543 992 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 VPS35Q96QK1 796 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 APOL4Q9BPW4 351 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 CCM2Q9BSQ5 444 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ATG10Q9H0Y0 220 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 IL1RAPQ9NPH3 570 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SERHLQ9NQF3 203 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 THG1LQ9NWX6 298 aaKnown RBP7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SCN3BQ9NY72 215 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 DKK3Q9UBP4 350 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 IL36AQ9UHA7 158 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 CD84Q9UIB8 345 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 ERVW-1Q9UQF0 538 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 HSPE1-MOB4S4R3N1 261 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 TANC1Q9C0D5 1861 aa7.16□□□□□ -1.26
ZNF540-206ENST00000589117 SCN5AQ14524 2016 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 PLXNA4Q9HCM2 1894 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 SLC16A6O15403 523 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 SGTAO43765 313 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 PFDN1O60925 122 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 PSIP1O75475 530 aaKnown RBP7.15□□□□□ -1.26
ZNF540-206ENST00000589117 LEFTY1O75610 366 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 LRATO95237 230 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 TIMP1P01033 207 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 GSNP06396 782 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 CCDC159P0C7I6 412 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 ELFN1P0C7U0 828 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 FAM157BP0CG42 384 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 MYCLP1P12525 358 aaPredicted RBP7.15□□□□□ -1.26
ZNF540-206ENST00000589117 GPX2P18283 190 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 RPL10P27635 214 aaKnown RBP7.15□□□□□ -1.26
ZNF540-206ENST00000589117 RPL3P39023 403 aaKnown RBP7.15□□□□□ -1.26
ZNF540-206ENST00000589117 DCTP40126 519 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 C21orf58P58505 322 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 PFN3P60673 137 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 PCDH1Q08174 1060 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 VEZF1Q14119 521 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 SPIDRQ14159 915 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 HIST2H2ACQ16777 129 aaPredicted RBP7.15□□□□□ -1.26
ZNF540-206ENST00000589117 VMACQ2NL98 169 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 PAGE2BQ5JRK9 111 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 CPTPQ5TA50 214 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 HIST2H2AA3Q6FI13 130 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 OR4F3Q6IEY1 312 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 OR2T5Q6IEZ7 315 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 AGTRAPQ6RW13 159 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 Q6ZVL8 140 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 R3HCC1LQ7Z5L2 792 aaKnown RBP7.15□□□□□ -1.26
ZNF540-206ENST00000589117 ANKRD46Q86W74 232 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 CHST14Q8NCH0 376 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 OR2T29Q8NH02 315 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 FAM81AQ8TBF8 368 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 GLYATL1Q969I3 302 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 CXorf40BQ96DE9 158 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 MED8Q96G25 268 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 APIPQ96GX9 242 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 IKZF5Q9H5V7 419 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 IGFLR1Q9H665 355 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 EPHX3Q9H6B9 360 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 SMURF2Q9HAU4 748 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 SGK2Q9HBY8 427 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 TM9SF3Q9HD45 589 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 TBC1D23Q9NUY8 699 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 ATAD3AQ9NVI7 634 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 ADPRHL2Q9NX46 363 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 GPRC5BQ9NZH0 403 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 EBF1Q9UH73 591 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 DPP7Q9UHL4 492 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 TPRKBQ9Y3C4 175 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 CORINQ9Y5Q5 1042 aa7.15□□□□□ -1.26
ZNF540-206ENST00000589117 OR2AG2A6NM03 316 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 H3BMQ9 156 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 PSMD11O00231 422 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 NOBOXO60393 691 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 BCL10O95999 233 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 FABP3P05413 133 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 SRPRAP08240 638 aaKnown RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 ENGP17813 658 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 IGFBP5P24593 272 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 ELK4P28324 431 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 KDELR2P33947 212 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 MAGEA2P43356 314 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 PHC1P78364 1004 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 PHEXP78562 749 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 KCNAB2Q13303 367 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 NAE1Q13564 534 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 HENMT1Q5T8I9 393 aaKnown RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 CPZQ66K79 652 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 GRHL2Q6ISB3 625 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 CES5AQ6NT32 575 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 THNSL2Q86YJ6 484 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 DCP2Q8IU60 420 aaKnown RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 FAM86B1Q8N7N1 296 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 PIK3C3Q8NEB9 887 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 OR13F1Q8NGS4 319 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 NUDT8Q8WV74 236 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 EZH1Q92800 747 aaPredicted RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms