RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SIGLEC12Q96PQ1 595 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 DMRTA2Q96SC8 542 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 FMO2Q99518 471 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 MIPEPQ99797 713 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 FOXC2Q99958 501 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 GORASP1Q9BQQ3 440 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 ZNF700Q9H0M5 742 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 CXXC4Q9H2H0 198 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 ETNK1Q9HBU6 452 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 NPDC1Q9NQX5 325 aaPredicted RBP8.11□□□□□ -1.11
SDF2-204ENST00000587338 ENAMQ9NRM1 1142 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 GRHL1Q9NZI5 618 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 TRHDEQ9UKU6 1024 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 GTF3C1Q12789 2109 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 VPS13CQ709C8 3753 aa8.11□□□□□ -1.11
SDF2-204ENST00000587338 LOC102723996A0A087X1L8 192 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 PRPF4O43172 522 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■■■□ 23.9
SDF2-204ENST00000587338 ASNA1O43681 348 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 SRPX2O60687 465 aaPredicted RBP8.1□□□□□ -1.11
SDF2-204ENST00000587338 SEC24DO94855 1032 aaPredicted RBP8.1□□□□□ -1.11
SDF2-204ENST00000587338 ZWINTO95229 277 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 FAM153BP0C7A2 387 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 ZNF24P17028 368 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 PSMB4P28070 264 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 PSMB5P28074 263 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 ADRA1AP35348 466 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 PLOD1Q02809 727 aaPredicted RBP8.1□□□□□ -1.11
SDF2-204ENST00000587338 FOLH1Q04609 750 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 TUBA3CQ13748 450 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 DSG2Q14126 1118 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 OR1C1Q15619 314 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 CEBPEQ15744 281 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 FAM153CQ494X1 144 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 ACER2Q5QJU3 275 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 ITPRIPL1Q6GPH6 555 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 TUBA3EQ6PEY2 450 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 ZDHHC24Q6UX98 284 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 CEP128Q6ZU80 1094 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 TAOK1Q7L7X3 1001 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 SIAH3Q8IW03 269 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 DCUN1D3Q8IWE4 304 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 PPIL6Q8IXY8 311 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 MDS2Q8NDY4 140 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 OR2L8Q8NGY9 312 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 FBXO25Q8TCJ0 367 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 ANKRD7Q92527 254 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 ZUFSPQ96AP4 578 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 MMABQ96EY8 250 aaPredicted RBP8.1□□□□□ -1.11
SDF2-204ENST00000587338 TBL1YQ9BQ87 522 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 UTP23Q9BRU9 249 aaKnown RBP8.1□□□□□ -1.11
SDF2-204ENST00000587338 TUBB6Q9BUF5 446 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 MENTQ9BUN1 341 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 SLC39A10Q9ULF5 831 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 MKL2Q9ULH7 1088 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 ATRQ13535 2644 aa8.1□□□□□ -1.11
SDF2-204ENST00000587338 IGHV3-20A0A0C4DH32 117 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 TCRBV7S3A2A0A539 114 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 ASPDHA6ND91 283 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 TARM1B6A8C7 271 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 QSOX1O00391 747 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 METTL18O95568 372 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 RPN2P04844 631 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 TPOP07202 933 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 APRTP07741 180 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 ANXA5P08758 320 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 OR56A5P0C7T3 313 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 C8orf89P0DMQ9 161 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 CD46P15529 392 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 H2AFXP16104 143 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 IVDP26440 423 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 PTGER1P34995 402 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 FDFT1P37268 417 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 CD96P40200 585 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 OC90Q02509 493 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 DHX9Q08211 1270 aaKnown RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 HSPA14Q0VDF9 509 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 MSLNQ13421 630 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 FASTKQ14296 549 aaKnown RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 SPARCL1Q14515 664 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 MORF4L2Q15014 288 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 SYT16Q17RD7 645 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 PARP6Q2NL67 630 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 BTBD16Q32M84 506 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 MFSD4BQ5TF39 518 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 ANKRD22Q5VYY1 191 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 CES4AQ5XG92 561 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 SPINK14Q6IE38 97 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 EMBQ6PCB8 327 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 Q71RC1 249 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 GALNTL5Q7Z4T8 443 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 FGD2Q7Z6J4 655 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 VRK3Q8IV63 474 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 CHERPQ8IWX8 916 aaKnown RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 DMRTC2Q8IXT2 367 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 SLC22A15Q8IZD6 547 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 TMEM178AQ8NBL3 297 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 FAM98AQ8NCA5 519 aaKnown RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 UBLCP1Q8WVY7 318 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 METTL21AQ8WXB1 218 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms