RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 RWDD2AQ9UIY3 292 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 OSGIN1Q9UJX0 560 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 RABL2BQ9UNT1 228 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ADAM18Q9Y3Q7 739 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 PKP3Q9Y446 797 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 NFE2L3Q9Y4A8 694 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 USP34Q70CQ2 3546 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 PCSK5Q92824 1860 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 COL4A2P08572 1712 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 C13orf42A0A1B0GVH6 325 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SLITRK3O94933 977 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 NR1D1P20393 614 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CCNE1P24864 410 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CDH12P55289 794 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 FOXL2P58012 376 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MYL6P60660 151 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 COL10A1Q03692 680 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF33AQ06730 810 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 GPM6BQ13491 265 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 TUBB2AQ13885 445 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 BTG3Q14201 252 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF260Q3ZCT1 412 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MDH1BQ5I0G3 518 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SHEQ5VZ18 495 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC2A7Q6PXP3 512 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 BZW1Q7L1Q6 419 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 PIWIL3Q7Z3Z3 882 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 GPR180Q86V85 440 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CEP57Q86XR8 500 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 C4orf32Q8N8J7 132 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MAB21L3Q8N8X9 362 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 IL17RCQ8NAC3 791 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 COLGALT1Q8NBJ5 622 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ATAD1Q8NBU5 361 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC26A7Q8TE54 656 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MAIP1Q8WWC4 291 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SLAMF9Q96A28 289 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 PERPQ96FX8 193 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 EEF2KMTQ96G04 330 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 P2RY11Q96G91 374 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 HSFY1Q96LI6 401 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 RMDN2Q96LZ7 410 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 KLHL5Q96PQ7 755 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 PKP4Q99569 1192 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 WACQ9BTA9 647 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 TUBB2BQ9BVA1 445 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 FN3KQ9H479 309 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 KLHL1Q9NR64 748 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.86□□□□□ -2.117e-6■■■■□ 21.6
SMCHD1-211ENST00000584897 CISD1Q9NZ45 108 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 VPS54Q9P1Q0 977 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SLCO3A1Q9UIG8 710 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 FBXW11Q9UKB1 542 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 KCNK7Q9Y2U2 307 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ANGPTL3Q9Y5C1 460 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MICAL3Q7RTP6 2002 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 KAT6AQ92794 2004 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 GOLGA6L9A6NEM1 432 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ALOX15BO15296 676 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 HUS1O60921 280 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 EGFP01133 1207 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SERPING1P05155 500 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SNRNP70P08621 437 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 C8orf89P0DMQ9 161 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 GHRP10912 638 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 RALAP11233 206 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 GP1BBP13224 206 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SYT1P21579 422 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CCKBRP32239 447 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 HSPA9P38646 679 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC9A3P48764 834 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CLCN3P51790 818 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ADPRHP54922 357 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC12A3P55017 1021 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MFAP3P55082 362 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ASIC1P78348 528 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 GCNT1Q02742 428 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 RBPJQ06330 500 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SULT2A1Q06520 285 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 DRP2Q13474 957 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 IL11RAQ14626 422 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 LPIN1Q14693 890 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 STX1AQ16623 288 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 KNOP1Q1ED39 458 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM98BQ52LJ0 330 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MPP7Q5T2T1 576 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CCDC183Q5T5S1 534 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 ARHGAP17Q68EM7 881 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 HEPHL1Q6MZM0 1159 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CACNA2D4Q7Z3S7 1137 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 C1QL2Q7Z5L3 287 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SPATA19Q7Z5L4 167 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 AMIGO2Q86SJ2 522 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 GPBP1Q86WP2 473 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 WBP2Q969T9 261 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 STRA6Q9BX79 667 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 B3GNT4Q9C0J1 378 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SETD4Q9NVD3 440 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms