RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SLC5A12Q1EHB4 618 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TTLL9Q3SXZ7 439 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CDKL4Q5MAI5 379 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 KIAA1614Q5VZ46 1190 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ANKS6Q68DC2 871 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 FCRL6Q6DN72 434 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 LRRC8EQ6NSJ5 796 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM71Q6P5X7 295 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SPESP1Q6UW49 350 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 USP53Q70EK8 1073 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 UBE2R2Q712K3 238 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 RNF44Q7L0R7 432 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC91Q7Z6B0 441 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 UBE3DQ7Z6J8 389 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TRIM73Q86UV7 250 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 AMIGO1Q86WK6 493 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PAQR7Q86WK9 346 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TMPRSS12Q86WS5 348 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CARFQ8N187 725 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 Q8N1X5 172 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 RIBC1Q8N443 379 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 D2HGDHQ8N465 521 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CHCHD4Q8N4Q1 142 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 NKAPQ8N5F7 415 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 Q8N9G6 341 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 BANPQ8N9N5 519 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 AVL9Q8NBF6 648 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PPFIBP2Q8ND30 876 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 OR2L3Q8NG85 312 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 OR4E2Q8NGC2 313 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 OR4K1Q8NGD4 311 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 OR9A1PQ8NGU1 263 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 WDR48Q8TAF3 677 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 RHEBL1Q8TAI7 183 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ACMSDQ8TDX5 336 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 UBLCP1Q8WVY7 318 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 RAD51AP1Q96B01 352 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SH3KBP1Q96B97 665 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 RHBDF1Q96CC6 855 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TLCD1Q96CP7 247 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CXorf40BQ96DE9 158 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 MTBPQ96DY7 904 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 MRRFQ96E11 262 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 WDR34Q96EX3 536 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 NAF1Q96HR8 494 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC74BQ96LY2 380 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TRAPPC9Q96Q05 1148 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 FERD3LQ96RJ6 166 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CD180Q99467 661 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 MAP3K3Q99759 626 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SH3GL2Q99962 352 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TSSK1BQ9BXA7 367 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 AICDAQ9GZX7 198 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SPNS1Q9H2V7 528 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TRIT1Q9H3H1 467 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 C12orf65Q9H3J6 166 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 EPB41L1Q9H4G0 881 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC32A1Q9H598 525 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF768Q9H5H4 540 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PPCSQ9HAB8 311 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PARVBQ9HBI1 364 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SYTL2Q9HCH5 934 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ZBTB26Q9HCK0 441 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 INTS7Q9NVH2 962 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ACTR10Q9NZ32 417 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 OR6C2Q9NZP2 312 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PSMC3IPQ9P2W1 217 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 COPG2Q9UBF2 871 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 POLG2Q9UHN1 485 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PTBP2Q9UKA9 531 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 APOBEC2Q9Y235 224 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PLAAQ9Y263 795 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 BTRCQ9Y297 605 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 NEUROG3Q9Y4Z2 214 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 HEBP2Q9Y5Z4 205 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 NUP214P35658 2090 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 DSPP15924 2871 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ATMQ13315 3056 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 KCNE1BA0A087WTH5 132 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 A0A087X1B8 175 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 A0A0J9YY10 115 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC189A1A4V9 331 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PIPSLA2A3N6 862 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 RHPN2P1A8MT19 583 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 A8MT66 165 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 C4orf51C9J302 202 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 F8W8V4 182 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 GOLGA8RI6L899 631 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 UBXN8O00124 270 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MATN2O00339 956 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 IFRD1O00458 451 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 E2F3O00716 465 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 HGSO14964 777 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 DUX1O43812 170 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PLIN3O60664 434 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 KRT38O76015 456 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CATP04040 527 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MPOP05164 745 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 INHBAP08476 426 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms