RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 DNAJC22Q8N4W6 341 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SLC5A8Q8N695 610 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 L3MBTL4Q8NA19 623 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 CAPSLQ8WWF8 208 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 FCGR1BQ92637 280 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 EFHD2Q96C19 240 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 ASIC4Q96FT7 647 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 TXNDC15Q96J42 360 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 CTRCQ99895 268 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 KLF16Q9BXK1 252 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 ROGDIQ9GZN7 287 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 ANKHQ9HCJ1 492 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 TMEM161AQ9NX61 479 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 TAS2R16Q9NYV7 291 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 PCDHGB3Q9Y5G1 929 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SAGE2PA6NJ88 616 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 H7C4K7 107 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 TNFRSF11BO00300 401 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 MTX2O75431 263 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 PTHP01270 115 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 RPLP0P05388 317 aaKnown RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 ACPPP15309 386 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 PRPH2P23942 346 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 TBCEQ15813 527 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 CYP27C1Q4G0S4 372 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 C6orf183Q5T699 404 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SPATC1Q76KD6 591 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SLC46A3Q7Z3Q1 461 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 METTL4Q8N3J2 472 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SYNPOQ8N3V7 929 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 MYDGFQ969H8 173 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SLC22A12Q96S37 553 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SLC12A9Q9BXP2 914 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SPASTQ9UBP0 616 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 RAPGEFL1Q9UHV5 662 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 CLCA1A8K7I4 914 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 ASNA1O43681 348 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 CDK1P06493 297 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 GGT2P36268 569 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 SMARCB1Q12824 385 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 CCSAPQ6IQ19 270 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-205ENST00000571272 ADNP2Q6IQ32 1131 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 TSEN54Q7Z6J9 526 aaKnown RBP16.86■□□□□ 0.29
SCARF1-205ENST00000571272 STX19Q8N4C7 294 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 ALG14Q96F25 216 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 EPYCQ99645 322 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 GABARAPL3Q9BY60 117 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 DNAJC11Q9NVH1 559 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 PCDHB7Q9Y5E2 793 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 PCDHB11Q9Y5F2 797 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 NUAK1O60285 661 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 POU2F1P14859 743 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 CD22P20273 847 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 SLC6A12P48065 614 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 HNRNPFP52597 415 aaKnown RBP16.86■□□□□ 0.29
SCARF1-205ENST00000571272 IRF8Q02556 426 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 TP53BP2Q13625 1128 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 ARMCX4Q5H9R4 360 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 LRRC66Q68CR7 880 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 CCBE1Q6UXH8 406 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-205ENST00000571272 SERPINA13PQ6UXR4 307 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 MSANTD1Q6ZTZ1 278 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 UPF1Q92900 1129 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCARF1-205ENST00000571272 CASD1Q96PB1 797 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 DUSP26Q9BV47 211 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 ADPRHL2Q9NX46 363 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 ZDHHC3Q9NYG2 299 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 SLC6A14Q9UN76 642 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 LYVE1Q9Y5Y7 322 aa16.86■□□□□ 0.29
SCARF1-205ENST00000571272 PCDH7O60245 1069 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 ADORA3P0DMS8 318 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 CBSLP0DN79 551 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 TCEA1P23193 301 aaKnown RBP16.85■□□□□ 0.29
SCARF1-205ENST00000571272 CBSP35520 551 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 CSNK2BP67870 215 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 ABRQ12979 859 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 CRHR2Q13324 411 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 PPIGQ13427 754 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCARF1-205ENST00000571272 CRTC1Q6UUV9 634 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 NAGSQ8N159 534 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 ATL1Q8WXF7 558 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 ASB11Q8WXH4 323 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 NIPSNAP1Q9BPW8 284 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 VPS29Q9UBQ0 182 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 CD84Q9UIB8 345 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 FRMPD3Q5JV73 1810 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 TMEM229AB2RXF0 380 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 GALTP07902 379 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 TUFMP49411 452 aaKnown RBP16.85■□□□□ 0.29
SCARF1-205ENST00000571272 ST3GAL4Q11206 333 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 GAB1Q13480 694 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 VEZF1Q14119 521 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 CST9Q5W186 159 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 TUBA3EQ6PEY2 450 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 GPR155Q7Z3F1 870 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 CELF2-AS1Q8N7Q2 184 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 OR10G2Q8NGC3 310 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 SYT17Q9BSW7 474 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 FAM120CQ9NX05 1096 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms