RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DGKAP23743 735 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 BDKRB2P30411 391 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CORO1AP31146 461 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 MTHFRP42898 656 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 RAD23BP54727 409 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 SLC12A3P55017 1021 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 TUBB4BP68371 445 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 OLIG2Q13516 323 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 DRAP1Q14919 205 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 C2orf76Q3KRA6 126 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 GLRA4Q5JXX5 417 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CELF3Q5SZQ8 465 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 RARS2Q5T160 578 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 GGNBP1Q5YKI7 109 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 METTL2BQ6P1Q9 378 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 ERN2Q76MJ5 926 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 SLC9B2Q86UD5 537 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 NLRP14Q86W24 1093 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 SYCP3Q8IZU3 236 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 C1orf87Q8N0U7 546 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CCAR2Q8N163 923 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 SIX6OS1Q8N1H7 587 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CIARTQ8N365 385 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 PTPMT1Q8WUK0 201 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 TEKT4Q8WW24 435 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CD101Q93033 1021 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 PDLIM5Q96HC4 596 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 GRAMD2BQ96HH9 432 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 METTL2AQ96IZ6 378 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 INPP4AQ96PE3 977 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 TSGA13Q96PP4 275 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 NEK1Q96PY6 1258 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 NODALQ96S42 347 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CMKLR1Q99788 373 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 SLC25A23Q9BV35 468 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 OSGEPL1Q9H4B0 414 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 THAP9Q9H5L6 903 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 SEBOXQ9HB31 216 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 MID1IP1Q9NPA3 183 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 PXMP2Q9NR77 195 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 TMEM30AQ9NV96 361 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 HPF1Q9NWY4 346 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CRNNQ9UBG3 495 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 UBA2Q9UBT2 640 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 TTC7AQ9ULT0 858 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 PADI3Q9ULW8 664 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 LIPT1Q9Y234 373 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 GINS2Q9Y248 185 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 AAR2Q9Y312 384 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 LIPGQ9Y5X9 500 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 FRYLO94915 3013 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 DOCK6Q96HP0 2047 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 PDCD11Q14690 1871 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 KIF26AQ9ULI4 1882 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 MTCL1Q9Y4B5 1905 aaKnown RBP3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 LOC100509620A0A075B734 347 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 KRT87PA6NCN2 255 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 TTC36A6NLP5 189 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 GRID2O43424 1007 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 HCRTR2O43614 444 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 STX6O43752 255 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 ZBTB14O43829 449 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 SLC25A12O75746 678 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 GCNT3O95395 438 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 GUCA1CO95843 209 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 OLFM2O95897 454 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 BCL10O95999 233 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 IGKV3-20P01619 116 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 TOP1P11387 765 aaKnown RBP3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 CDH1P12830 882 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 MYOD1P15172 320 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 AMD1P17707 334 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 DDX5P17844 614 aaKnown RBP3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 ERCC2P18074 760 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 UBA1P22314 1058 aaKnown RBP3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 PTPN3P26045 913 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 MAPK3P27361 379 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 CLCNKAP51800 687 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 EVCP57679 992 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 MGAT3Q09327 533 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 RALGDSQ12967 914 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 RCN2Q14257 317 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 ZNF273Q14593 569 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 MORF4L2Q15014 288 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 QRICH1Q2TAL8 776 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 SMU1Q2TAY7 513 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 PCGF3Q3KNV8 242 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 USP41Q3LFD5 358 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 KCNT1Q5JUK3 1230 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 C6orf141Q5SZD1 244 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 TMEM198Q66K66 360 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 DUS1LQ6P1R4 473 aaKnown RBP3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 FAM122CQ6P4D5 195 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 KCTD18Q6PI47 426 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 FOXL2NBQ6ZUU3 175 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 GSTA5Q7RTV2 222 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 TRMT1LQ7Z2T5 733 aaKnown RBP3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 SPATA19Q7Z5L4 167 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 EXOC3L1Q86VI1 746 aa3.19□□□□□ -1.9
HMGB1P6-201ENST00000569046 SFR1Q86XK3 245 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms