RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 NSA2O95478 260 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 WDPCPO95876 746 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 CELA2AP08217 269 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 RNF224P0DH78 156 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 ITGAMP11215 1152 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 COX6A1P12074 109 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 CDH1P12830 882 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 IL1RNP18510 177 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 GABRB3P28472 473 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 BCL6P41182 706 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 HNF4AP41235 474 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 PAFAH1B1P43034 410 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 TSFMP43897 325 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 XCR1P46094 333 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 CCR8P51685 355 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 PGGT1BP53609 377 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 ARL4CP56559 192 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 GNG11P61952 73 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 TBPL1P62380 186 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 TIAL1Q01085 375 aaKnown RBP eCLIP6.07□□□□□ -1.44
TCF4-228ENST00000565393 MEF2AQ02078 507 aaPredicted RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 SRSF11Q05519 484 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 ZNF33BQ06732 778 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 RBBP5Q15291 538 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 NSDHLQ15738 373 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 PHKG1Q16816 387 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 MSS51Q4VC12 460 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 RBM20Q5T481 1227 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 HECTD2Q5U5R9 776 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 DUPD1Q68J44 220 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 RPUSD3Q6P087 351 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 LCTLQ6UWM7 567 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 MBOAT1Q6ZNC8 495 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 RIPOR1Q6ZS17 1223 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 KIAA0408Q6ZU52 694 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 SYDE1Q6ZW31 735 aaPredicted RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 PRSS41Q7RTY9 318 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 MAMDC2Q7Z304 686 aaPredicted RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 CPEB2Q7Z5Q1 589 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 ANKMY2Q8IV38 441 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 ZC3H7AQ8IWR0 971 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 AMER2Q8N7J2 671 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 BCORP1Q8N888 145 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 KCT2Q8NC54 265 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 ZCCHC10Q8TBK6 192 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 ATL1Q8WXF7 558 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 PSMF1Q92530 271 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 TM4SF19Q96DZ7 209 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 SNF8Q96H20 258 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 PEX11GQ96HA9 241 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 IMMP1LQ96LU5 166 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 ZNF354BQ96LW1 612 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 PWWP2AQ96N64 755 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 RUNDC3BQ96NL0 473 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 HAUS8Q9BT25 410 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 TUBB6Q9BUF5 446 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 FAM129AQ9BZQ8 928 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 VN1R1Q9GZP7 353 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 GRPEL1Q9HAV7 217 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 KCNK13Q9HB14 408 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 PRM3Q9NNZ6 103 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 OLAHQ9NV23 265 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 CHMP2BQ9UQN3 213 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 NAALAD2Q9Y3Q0 740 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 AHCTF1Q8WYP5 2266 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 LOC102723996A0A087X1L8 192 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 A0A1B0GUH1 482 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 WIPF3A6NGB9 483 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 NDUFS4O43181 175 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 B4GALT2O60909 372 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 RDH16O75452 317 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 CDC123O75794 336 aaPredicted RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 CLDN1O95832 211 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 LDLRP01130 860 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 CRYABP02511 175 aaKnown RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 SLC35G6P0C7Q6 338 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 EDN3P14138 238 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 IVDP26440 423 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 AGTR2P50052 363 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 ST13P50502 369 aaKnown RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 TNFSF10P50591 281 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 ITGA8P53708 1063 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 SLC12A2P55011 1212 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 PER3P56645 1201 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 OR4D2P58180 307 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 SNRPNP63162 240 aaKnown RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 OC90Q02509 493 aaPredicted RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 PDIA2Q13087 525 aaKnown RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 SP140Q13342 867 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 MORF4L2Q15014 288 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 PCOLCEQ15113 449 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 CATSPEREQ5SY80 951 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 FCRLBQ6BAA4 426 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 SP5Q6BEB4 398 aaPredicted RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 ZNF787Q6DD87 383 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 FAM45BPQ6NSW5 357 aa6.06□□□□□ -1.44
TCF4-228ENST00000565393 TMEM214Q6NUQ4 689 aaKnown RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 HIBCHQ6NVY1 386 aaPredicted RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 TRMT10BQ6PF06 316 aaKnown RBP6.06□□□□□ -1.44
TCF4-228ENST00000565393 TMEM205Q6UW68 189 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms