RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TLX2O43763 284 aaPredicted RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 ECE2O60344 883 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 F3P13726 295 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 ITIH1P19827 911 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 IL11P20809 199 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 AADACP22760 399 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 CAPGP40121 348 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 CETN2P41208 172 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 ZFP36L1Q07352 338 aaKnown RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 ZNF177Q13360 481 aaPredicted RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 TMEM266Q2M3C6 531 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 SLC25A30Q5SVS4 291 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 NAA16Q6N069 864 aaPredicted RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 CYB5D1Q6P9G0 228 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 SLC39A11Q8N1S5 342 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 TCEANCQ8N8B7 351 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 KCTD6Q8NC69 237 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 HDAC11Q96DB2 347 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 PGAP3Q96FM1 320 aaPredicted RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 ZNF558Q96NG5 402 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 SLF1Q9BQI6 1058 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 RPP25Q9BUL9 199 aaKnown RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 RAVER2Q9HCJ3 691 aaKnown RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 GPN1Q9HCN4 374 aaPredicted RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 HACD3Q9P035 362 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 URADA6NGE7 173 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 SHISA9B4DS77 424 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 SLC1A7O00341 560 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 NXPH4O95158 308 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 FOLR2P14207 255 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 SELEP16581 610 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 AZU1P20160 251 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 IL4RP24394 825 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 RAB28P51157 221 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 OR1D5P58170 312 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 DLK1P80370 383 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 ILF2Q12905 390 aaKnown RBP3.83□□□□□ -1.8
UBR1-205ENST00000564540 PEX6Q13608 980 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 PTGISQ16647 500 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 ALDH1L2Q3SY69 923 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 PI4KAP1Q8N8J0 262 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 NPRL2Q8WTW4 380 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 SPATA33Q96N06 139 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 NEDD4LQ96PU5 975 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 SDCBP2Q9H190 292 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 TUBB1Q9H4B7 451 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 ACTL8Q9H568 366 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 HEXA-AS1Q9H8Q6 139 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 TBC1D13Q9NVG8 400 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 CROCCQ5TZA2 2017 aa3.83□□□□□ -1.8
UBR1-205ENST00000564540 RTCAO00442 366 aaKnown RBP3.82□□□□□ -1.8
UBR1-205ENST00000564540 BCL2L11O43521 198 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 CYTIPO60759 359 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 HOXD4P09016 255 aaPredicted RBP3.82□□□□□ -1.8
UBR1-205ENST00000564540 MYBL1P10243 752 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 AOC1P19801 751 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 PPP5CP53041 499 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 AIMP1Q12904 312 aaKnown RBP3.82□□□□□ -1.8
UBR1-205ENST00000564540 MS4A18Q3C1V0 323 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 SPECC1Q5M775 1068 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 SUSD4Q5VX71 490 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 CPEB2Q7Z5Q1 589 aaKnown RBP3.82□□□□□ -1.8
UBR1-205ENST00000564540 GBP7Q8N8V2 638 aaPredicted RBP3.82□□□□□ -1.8
UBR1-205ENST00000564540 OR4D10Q8NGI6 311 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 OR4C15Q8NGM1 316 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 ZNF597Q96LX8 424 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 RIMS4Q9H426 269 aaPredicted RBP3.82□□□□□ -1.8
UBR1-205ENST00000564540 XAB2Q9HCS7 855 aaKnown RBP3.82□□□□□ -1.8
UBR1-205ENST00000564540 GPR83Q9NYM4 423 aa3.82□□□□□ -1.8
UBR1-205ENST00000564540 ATRXP46100 2492 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 NOTCH2Q04721 2471 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 C17orf105B2RV13 164 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 LRCH4O75427 683 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 MYOGP15173 224 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 DUTP33316 252 aaKnown RBP3.81□□□□□ -1.8
UBR1-205ENST00000564540 SFTPDP35247 375 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 FCHO2Q0JRZ9 810 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 PRPF4BQ13523 1007 aaKnown RBP3.81□□□□□ -1.8
UBR1-205ENST00000564540 DUSP5Q16690 384 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 C3P1Q6ZMU1 363 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 Q6ZR54 194 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 CDHR3Q6ZTQ4 885 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 SLC25A42Q86VD7 318 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 MFN1Q8IWA4 741 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 OR52B6Q8NGF0 335 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 OR10G7Q8NGN6 311 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 PYCR2Q96C36 320 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 CHCHD5Q9BSY4 110 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 FZD8Q9H461 694 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 NLGN3Q9NZ94 848 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 BCCIPQ9P287 314 aaKnown RBP eCLIP3.81□□□□□ -1.8
UBR1-205ENST00000564540 STYXL1Q9Y6J8 313 aa3.81□□□□□ -1.8
UBR1-205ENST00000564540 GON4LQ3T8J9 2241 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 IGHV3-38A0A0C4DH36 116 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 SYNDIG1LA6NDD5 238 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 SAP30O75446 220 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 BCL3P20749 454 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 HSD17B3P37058 310 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms