RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 LIPHQ8WWY8 451 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 RLN3Q8WXF3 142 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 CPA5Q8WXQ8 436 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 WBP2Q969T9 261 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 SLCO4A1Q96BD0 722 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 FAM136AQ96C01 138 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 FCRL4Q96PJ5 515 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 PRR25Q96S07 402 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 MRPL37Q9BZE1 423 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 MCOLN1Q9GZU1 580 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 ATG10Q9H0Y0 220 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 TMEM245Q9H330 911 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 TMEM231Q9H6L2 316 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 GTSE1Q9NYZ3 720 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 KLHL8Q9P2G9 620 aaPredicted RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 FOXA2Q9Y261 457 aaPredicted RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 GMEB1Q9Y692 573 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 AKAP11Q9UKA4 1901 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF536O15090 1300 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 SCN9AQ15858 1988 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 COL4A5P29400 1685 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 DUXAA6NLW8 204 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 BTBD19C9JJ37 291 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 E7ENX8 843 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 RFXAPO00287 272 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 ZBTB5O15062 677 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 PRAMEF11O60813 436 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 PRAF2O60831 178 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 CSO75390 466 aaKnown RBP4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 NDUFB10O96000 172 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 C1RP00736 705 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 CSTAP01040 98 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 ERVK-10P10266 1014 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF3P17036 446 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 MATN1P21941 496 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 CPN2P22792 545 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 GKP32189 559 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 CDKN1BP46527 198 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC25A3Q00325 362 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 CNTN2Q02246 1040 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 HSF2Q03933 536 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 PTPAQ15257 358 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 SOWAHAQ2M3V2 549 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 CCNYL2Q5T2Q4 361 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 ENPP7Q6UWV6 458 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 Q6ZUG5 572 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 BIVMQ86UB2 503 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 TMEM126BQ8IUX1 230 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 MISPQ8IVT2 679 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 TCAIMQ8N3R3 496 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 TMEM217Q8N7C4 229 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 FAM71CQ8NEG0 241 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 WIPF2Q8TF74 440 aaPredicted RBP4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 SNX19Q92543 992 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 EDAQ92838 391 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 LOXL4Q96JB6 756 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 CATSPER2Q96P56 530 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 TAAR6Q96RI8 345 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 MYADMQ96S97 322 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 SPAG8Q99932 426 aaPredicted RBP4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 MXRA8Q9BRK3 442 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 SPZ1Q9BXG8 430 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 RNF26Q9BY78 433 aaPredicted RBP4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 FRMD8Q9BZ67 464 aaPredicted RBP4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 RAB34Q9BZG1 259 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 AMBRA1Q9C0C7 1298 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 NACA2Q9H009 215 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 MED20Q9H944 212 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 CD320Q9NPF0 282 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 PIGVQ9NUD9 493 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 ATXN10Q9UBB4 475 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 MGAT4CQ9UBM8 478 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 PCDHA12Q9UN75 941 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 PCDHAC2Q9Y5I4 1007 aa4.98□□□□□ -1.61
VPS35P1-201ENST00000563400 KLF18A0A0U1RQI7 1052 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 OR2AG2A6NM03 316 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 OR52A4PA6NMU1 304 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 C4orf47A7E2U8 309 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SPECC1L-ADORA2AF8WAN1 911 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 H3BQV1 296 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RRP8O43159 456 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 PLPP2O43688 288 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 NUAK1O60285 661 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ATP6V1G1O75348 118 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 BAG4O95429 457 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 BMP15O95972 392 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 S100A6P06703 90 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TPM3P06753 285 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 FESP07332 822 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RAB40ALP0C0E4 278 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DANCRP0C864 163 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 OR8G3PP0DMU2 310 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CYP2D6P10635 497 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 HPGDP15428 266 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 NCF2P19878 526 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DUSP1P28562 367 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RYKP34925 604 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 OR1D2P34982 312 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms