RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 NT5C1B-RDH14C9J2C7 533 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 GFRA2O00451 464 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 KMOO15229 486 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 TRBC1P01850 177 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 PTPN2P17706 415 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 TNFRSF1BP20333 461 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 SPAM1P38567 509 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 RGS6P49758 472 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 CRISP3P54108 245 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 UGT2B15P54855 530 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 WNT3P56703 355 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 VEZF1Q14119 521 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 DMC1Q14565 340 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 SF1Q15637 639 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 ZXDCQ2QGD7 858 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 GGTA1PQ4G0N0 100 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 SYNPOQ8N3V7 929 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 OR10G2Q8NGC3 310 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 KCNS3Q9BQ31 491 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 ATG10Q9H0Y0 220 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 TMEM184CQ9NVA4 438 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 C14orf119Q9NWQ9 140 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 MKLN1Q9UL63 735 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 PCDHB11Q9Y5F2 797 aa13.5□□□□□ -0.25
VPS9D1-202ENST00000561976 TRBV5-4A0A0C4DH59 114 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 A6NL46 340 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 M0R129 80 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 ZW10O43264 779 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 IDH3BO43837 385 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 OPN1SWP03999 348 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 LAMP1P11279 417 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 PRPH2P23942 346 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 NSG1P42857 185 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 AP1S1P61966 158 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CHIT1Q13231 466 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 PPIGQ13427 754 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■□□□ 13.3
VPS9D1-202ENST00000561976 BOP1Q14137 746 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 KCNA10Q16322 511 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 IQCCQ4KMZ1 466 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 RTP2Q5QGT7 225 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 C10orf62Q5T681 223 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 FAM124AQ86V42 546 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 NLGN4XQ8N0W4 816 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 PSD4Q8NDX1 1056 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 BBS2Q9BXC9 721 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 DDX28Q9NUL7 540 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 FAM120CQ9NX05 1096 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 DUSP12Q9UNI6 340 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 PCDHGA3Q9Y5H0 932 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 NOX1Q9Y5S8 564 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 VWA8A3KMH1 1905 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 ZNF840PA6NDX5 716 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 LOC110117498-PIK3R3F6TDL0 507 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 SCN2BO60939 215 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 SH3BGRLO75368 114 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CBSLP0DN79 551 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CCR7P32248 378 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CBSP35520 551 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 SPIBQ01892 262 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 TP53BP2Q13625 1128 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 MED22Q15528 200 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 GPR33Q49SQ1 333 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 PRSS55Q6UWB4 352 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 OR8H2Q8N162 312 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 MTERF1Q99551 399 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 DOHHQ9BU89 302 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CWH43Q9H720 699 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 RLIMQ9NVW2 624 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 ERVK13-1Q9NX77 482 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 TAS2R16Q9NYV7 291 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 ZNF221Q9UK13 617 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 LYVE1Q9Y5Y7 322 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 ADAMDEC1O15204 470 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 YY2O15391 372 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 SSX4O60224 188 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 KIAA0513O60268 411 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 MFN2O95140 757 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 ABCB1P08183 1280 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 AOAHP28039 575 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CSKP41240 450 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CASP9P55211 416 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CDH12P55289 794 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 OR2B6P58173 313 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 OLR1P78380 273 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 TSPAN33Q86UF1 283 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CYP4Z2PQ8N1L4 340 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 DEPDC4Q8N2C3 294 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 TCAIMQ8N3R3 496 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 L3MBTL4Q8NA19 623 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 IL17RDQ8NFM7 739 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 SOCS4Q8WXH5 440 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 AGAP4Q96P64 663 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 HHIPQ96QV1 700 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 CLSTN3Q9BQT9 956 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 EMILIN2Q9BXX0 1053 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 DNAJC11Q9NVH1 559 aa13.49□□□□□ -0.25
VPS9D1-202ENST00000561976 MN1Q10571 1320 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms