RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 NELFBQ8WX92 580 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 SLCO2A1Q92959 643 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 GSDMAQ96QA5 445 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 SNRNP25Q9BV90 132 aaKnown RBP4.99□□□□□ -1.61
HERC1-213ENST00000561359 XPO4Q9C0E2 1151 aaKnown RBP4.99□□□□□ -1.61
HERC1-213ENST00000561359 ZNF700Q9H0M5 742 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 MVB12BQ9H7P6 319 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 UGT1A7Q9HAW7 530 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 UGT1A10Q9HAW8 530 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 UGT1A8Q9HAW9 530 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 KCNK13Q9HB14 408 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 LRTM1Q9HBL6 345 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 SIX2Q9NPC8 291 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 PNPLA3Q9NST1 481 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 ETNK2Q9NVF9 386 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 RBM22Q9NW64 420 aaKnown RBP eCLIP4.99□□□□□ -1.61
HERC1-213ENST00000561359 SPHK1Q9NYA1 384 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 CWC15Q9P013 229 aaKnown RBP4.99□□□□□ -1.61
HERC1-213ENST00000561359 TRPC4Q9UBN4 977 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 GPR160Q9UJ42 338 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 PRDM4Q9UKN5 801 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 KLHL20Q9Y2M5 609 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 ZNF711Q9Y462 761 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 SVEP1Q4LDE5 3571 aa4.99□□□□□ -1.61
HERC1-213ENST00000561359 LOC102723996A0A087X1L8 192 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 A0A0G2JK05 382 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 HYKKA2RU49 373 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 KLHL33A6NCF5 533 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 MBD3L4A6NDZ8 208 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 MBD3L5A6NJ08 208 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 FAM47E-STBD1D6RA91 191 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 DDX3XO00571 662 aaKnown RBP eCLIP4.98□□□□□ -1.61
HERC1-213ENST00000561359 FFAR3O14843 346 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 GPR42O15529 346 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 GPR39O43194 453 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 TLX2O43763 284 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 NME2P1O60361 137 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 NEURL1O76050 574 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 SEC24DO94855 1032 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 GOSR1O95249 250 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 STATHP02808 62 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 HRGP04196 525 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 CYP1A1P04798 512 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 CALB1P05937 261 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 HSP90AA1P07900 732 aaKnown RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 MAGP20916 626 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 SHMT2P34897 504 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 SERPINB6P35237 376 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 CCNFP41002 786 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 CD86P42081 329 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 HCAR3P49019 387 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 ASCL1P50553 236 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 ZNF135P52742 658 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 SRSF2Q01130 221 aaKnown RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 AP1B1Q10567 949 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 SLC14A2Q15849 920 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 TAZQ16635 292 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 PDLIM3Q53GG5 364 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 CMPK2Q5EBM0 449 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 PLAG1Q6DJT9 500 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 PRMT9Q6P2P2 845 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 FAM151BQ6UXP7 276 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 UNC5AQ6ZN44 842 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 RNF111Q6ZNA4 994 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 NT5DC3Q86UY8 548 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 KIF18BQ86Y91 864 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 SLC13A5Q86YT5 568 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 CRLF3Q8IUI8 442 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 LGI4Q8N135 537 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 PPM1NQ8N819 430 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 ANKS4BQ8N8V4 417 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 DDHD1Q8NEL9 900 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 ARRDC2Q8TBH0 407 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 METTL21AQ8WXB1 218 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 RNASE6Q93091 150 aaKnown RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 SMARCE1Q969G3 411 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 EAF1Q96JC9 268 aaPredicted RBP4.98□□□□□ -1.61
HERC1-213ENST00000561359 IMMP1LQ96LU5 166 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 CCL19Q99731 98 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 SELENOSQ9BQE4 189 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 PLCD4Q9BRC7 762 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 DEFB127Q9H1M4 99 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 MAGEE1Q9HCI5 957 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 IL26Q9NPH9 171 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 ALKBH4Q9NXW9 302 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 B4GALT7Q9UBV7 327 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 CDC42EP3Q9UKI2 254 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 ICKQ9UPZ9 632 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 ZNF407Q9C0G0 2248 aa4.98□□□□□ -1.61
HERC1-213ENST00000561359 USF3Q68DE3 2245 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 CPAMD8Q8IZJ3 1885 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 IGLV3-12A0A075B6K2 115 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 A0A087X1B8 175 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 IGHV3-20A0A0C4DH32 117 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 A0A1W2PPR1 153 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 KLRC4-KLRK1H3BQV0 150 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 DVL2O14641 736 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 AURKAO14965 403 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms