RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 TRAF3Q13114 568 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 GTF2H2Q13888 395 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 SLBPQ14493 270 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 IL11RAQ14626 422 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 TBCCQ15814 346 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 AGBL2Q5U5Z8 902 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 ZNF385CQ66K41 422 aaPredicted RBP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 GTF2H2CQ6P1K8 395 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 FOXR1Q6PIV2 292 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 TIPARPQ7Z3E1 657 aaKnown RBP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 TMPRSS11BQ86T26 416 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 DTX1Q86Y01 620 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 C10orf107Q8IVU9 208 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 L3MBTL4Q8NA19 623 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 MDM1Q8TC05 714 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 RDH11Q8TC12 318 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 CREB3L4Q8TEY5 395 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 TAAR9Q96RI9 348 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 ZFYVE21Q9BQ24 234 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 MACROD1Q9BQ69 325 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 MECRQ9BV79 373 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 ERVK-6Q9BXR3 956 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 CENPHQ9H3R5 247 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 EHD1Q9H4M9 534 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 NOL11Q9H8H0 719 aaKnown RBP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 CNOT10Q9H9A5 744 aaKnown RBP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 AKIRIN1Q9H9L7 192 aaPredicted RBP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 STARD5Q9NSY2 213 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 OXSMQ9NWU1 459 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 OPTCQ9UBM4 332 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 DKK4Q9UBT3 224 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 TMCO1Q9UM00 188 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 PLCL2Q9UPR0 1127 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 MRPS2Q9Y399 296 aaKnown RBP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 DYRK1BQ9Y463 629 aa8.64□□□□□ -1.03
HMG20A-209ENST00000559728 TNPO3Q9Y5L0 923 aaKnown RBP8.64□□□□□ -1.03
HMG20A-209ENST00000559728 ZFHX4Q86UP3 3567 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 TEX51A0A1B0GUA7 166 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 TRBC2A0A5B9 178 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 PABPN1LA6NDY0 278 aaKnown RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 C1QTNF9BB2RNN3 333 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 C4orf51C9J302 202 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 TAF4O00268 1085 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 TERTO14746 1132 aaKnown RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 POLR1CO15160 346 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 SRPX2O60687 465 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 STATHP02808 62 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 BPGMP07738 259 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 C1QTNF9P0C862 333 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 JMJD7P0C870 316 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 MYL2P10916 166 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 EPB42P16452 691 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 SLC18A1P54219 525 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 NAGLUP54802 743 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 RAB15P59190 212 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 ERVPABLB-1P60509 514 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 FOXM1Q08050 763 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 CHIT1Q13231 466 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 NAA25Q14CX7 972 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 HKDC1Q2TB90 917 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 ZC3H12BQ5HYM0 836 aaKnown RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 TMTC4Q5T4D3 741 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 GRHL2Q6ISB3 625 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 LCN10Q6JVE6 187 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 LETMD1Q6P1Q0 360 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 ADCK2Q7Z695 626 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 SYVN1Q86TM6 617 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 BPHLQ86WA6 291 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 PPP1R3BQ86XI6 285 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 LSMEM2Q8N112 164 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 SNX31Q8N9S9 440 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 MFSD9Q8NBP5 474 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 NXPE2Q96DL1 559 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 PTCD3Q96EY7 689 aaKnown RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 ATP6V1G3Q96LB4 118 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 C10orf90Q96M02 699 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 CDK15Q96Q40 435 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 NTMT1Q9BV86 223 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 GATA5Q9BWX5 397 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 NT5DC2Q9H857 520 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 IPPKQ9H8X2 491 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 SLC22A11Q9NSA0 550 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 RARRES3Q9UL19 164 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 RNF11Q9Y3C5 154 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 TMEM184BQ9Y519 407 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-209ENST00000559728 KNTC1P50748 2209 aa8.63□□□□□ -1.03
HMG20A-209ENST00000559728 LAMA5O15230 3695 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 TMEM120BA0PK00 339 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 ZNF749O43361 778 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 FOXS1O43638 330 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 STK17BO94768 372 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 KIAA0754O94854 1291 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 SUPT7LO94864 414 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 SMIM10L1P0DMW3 83 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 TAC1P20366 129 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 SERPINB4P48594 390 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 ARL4DP49703 201 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms