RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 LSM12Q3MHD2 195 aaKnown RBP14.26□□□□□ -0.13
VPS18-202ENST00000558474 ATP6AP1LQ52LC2 224 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 ZC3H12BQ5HYM0 836 aaKnown RBP14.26□□□□□ -0.13
VPS18-202ENST00000558474 TCHHL1Q5QJ38 904 aaPredicted RBP14.26□□□□□ -0.13
VPS18-202ENST00000558474 VWA5B1Q5TIE3 1220 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 FCRL6Q6DN72 434 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 TMEM71Q6P5X7 295 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 CHSY3Q70JA7 882 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 RNF44Q7L0R7 432 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 PRSS42Q7Z5A4 293 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 SPATA19Q7Z5L4 167 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 IFI44Q8TCB0 444 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 RHBDD1Q8TEB9 315 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 TUBGCP3Q96CW5 907 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 CMTM7Q96FZ5 175 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 C3orf30Q96M34 536 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 TRAPPC9Q96Q05 1148 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 CDC6Q99741 560 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 SPNS1Q9H2V7 528 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 AKTIPQ9H8T0 292 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 DMRT3Q9NQL9 472 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 FARSBQ9NSD9 589 aaKnown RBP14.26□□□□□ -0.13
VPS18-202ENST00000558474 SIRT5Q9NXA8 310 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 PDP2Q9P2J9 529 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 VPS29Q9UBQ0 182 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 FTSJ1Q9UET6 329 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 PILRAQ9UKJ1 303 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 HCN4Q9Y3Q4 1203 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 PCDHGA4Q9Y5G9 962 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 USP34Q70CQ2 3546 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 CPED1A4D0V7 1026 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 MAGEB17A8MXT2 336 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 HAT1O14929 419 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 LSM1O15116 133 aaKnown RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 SNRNP200O75643 2136 aaKnown RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 SEMA3DO95025 777 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 ZBTB11O95625 1053 aaPredicted RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 CPNE6O95741 557 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 SERPINA6P08185 405 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 MSL3P1P0C860 447 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 TGM1P22735 817 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 ADSLP30566 484 aaPredicted RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 MRPL19P49406 292 aaKnown RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 ERVK-8P63133 956 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 EMX2Q04743 252 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 ILKQ13418 452 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 PWP1Q13610 501 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 NR6A1Q15406 480 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 AASDHQ4L235 1098 aaPredicted RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 TMEM35AQ53FP2 167 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 PERM1Q5SV97 790 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 NAXDQ8IW45 347 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS18-202ENST00000558474 ZNF655Q8N720 491 aaPredicted RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 C19orf47Q8N9M1 422 aaKnown RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 ANKRD53Q8N9V6 530 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 ZNF740Q8NDX6 193 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 OR4D9Q8NGE8 314 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 OR52B2Q96RD2 323 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 ZFYVE21Q9BQ24 234 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 CENPKQ9BS16 269 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 ACPTQ9BZG2 426 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 LRRN3Q9H3W5 708 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 WDR55Q9H6Y2 383 aaPredicted RBP14.25□□□□□ -0.13
VPS18-202ENST00000558474 C1orf109Q9NX04 203 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 ASIC5Q9NY37 505 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 AHSPQ9NZD4 102 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 HEY2Q9UBP5 337 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 BTBD3Q9Y2F9 522 aa14.25□□□□□ -0.13
VPS18-202ENST00000558474 FEZF1A0PJY2 475 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 TXNDC9O14530 226 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 SLC22A2O15244 555 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 LCMT2O60294 686 aaKnown RBP14.24□□□□□ -0.13
VPS18-202ENST00000558474 SRPX2O60687 465 aaPredicted RBP14.24□□□□□ -0.13
VPS18-202ENST00000558474 ANKRD34CP0C6C1 535 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 MAPK1P28482 360 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 BCL6P41182 706 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 LSSP48449 732 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 PPM1FP49593 454 aaPredicted RBP14.24□□□□□ -0.13
VPS18-202ENST00000558474 ATP4BP51164 291 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 NEK2P51955 445 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 ZIC1Q15915 447 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 GSTA3Q16772 222 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 SPIN4Q56A73 249 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 SGO1Q5FBB7 561 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 SPDYAQ5MJ70 313 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 C6orf136Q5SQH8 315 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 DEPDC1Q5TB30 811 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 NXNQ6DKJ4 435 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 FBXO42Q6P3S6 717 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 TRIM73Q86UV7 250 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 ZFAND4Q86XD8 727 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 FAM20CQ8IXL6 584 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 FAM9CQ8IZT9 166 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 Q8N9G6 341 aaPredicted RBP14.24□□□□□ -0.13
VPS18-202ENST00000558474 SRFBP1Q8NEF9 429 aaKnown RBP14.24□□□□□ -0.13
VPS18-202ENST00000558474 OR2T11Q8NH01 316 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 NT5CQ8TCD5 201 aa14.24□□□□□ -0.13
VPS18-202ENST00000558474 MTFMTQ96DP5 389 aaKnown RBP14.24□□□□□ -0.13
VPS18-202ENST00000558474 TM4SF19Q96DZ7 209 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms