RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PSMB5P28074 263 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 CD1CP29017 333 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 PEBP1P30086 187 aaKnown RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 ARRB2P32121 409 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 SCTRP47872 440 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 STXBP1P61764 594 aaKnown RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 RGS1Q08116 209 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 PWP1Q13610 501 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 CUL3Q13618 768 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 UGT3A2Q3SY77 523 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 AMZ1Q400G9 498 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 ATP6AP1LQ52LC2 224 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 TCTE1Q5JU00 501 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 CACHD1Q5VU97 1274 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 KIAA1614Q5VZ46 1190 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 CES4AQ5XG92 561 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 EPGNQ6UW88 154 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 RPS27LQ71UM5 84 aaKnown RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 SPATA19Q7Z5L4 167 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 BPHLQ86WA6 291 aaPredicted RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 PAQR7Q86WK9 346 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 CACNA2D3Q8IZS8 1091 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 C19orf47Q8N9M1 422 aaKnown RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 MFSD9Q8NBP5 474 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 FLVCR1-AS1Q8TAF5 88 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 WDR20Q8TBZ3 569 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 AGR3Q8TD06 166 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 N4BP2L2Q92802 583 aaPredicted RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 TMEM74Q96NL1 305 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 TGM7Q96PF1 710 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 TRAPPC9Q96Q05 1148 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 GFM1Q96RP9 751 aaKnown RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 ROGDIQ9GZN7 287 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 FANCEQ9HB96 536 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 ACSS2Q9NR19 701 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 VPS29Q9UBQ0 182 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 ZNF225Q9UK10 706 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 MAPRE3Q9UPY8 281 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 FIS1Q9Y3D6 152 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 AP1M2Q9Y6Q5 423 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.51
TPM1-209ENST00000558072 AGRPO00253 132 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 DIAPH2O60879 1101 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 DCTN3O75935 186 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 SEMA3DO95025 777 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 RPLP0P05388 317 aaKnown RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 SERPINA6P08185 405 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 ACPPP15309 386 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 DDX5P17844 614 aaKnown RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 LBPP18428 481 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 MAGP20916 626 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 PRPH2P23942 346 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 VARSP26640 1264 aaKnown RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 TSFMP43897 325 aaKnown RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 CCR10P46092 362 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 GSTM5P46439 218 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 PPP1CAP62136 330 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 HSD11B2P80365 405 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 BTKQ06187 659 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 SPIDRQ14159 915 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 PDCD2Q16342 344 aaPredicted RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 SPIN4Q56A73 249 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 CLEC6AQ6EIG7 209 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 PAGE2Q7Z2X7 111 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 GLRX5Q86SX6 157 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 DEFB124Q8NES8 71 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 OR8K5Q8NH50 307 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 ZNF473Q8WTR7 871 aaKnown RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 TUBGCP3Q96CW5 907 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 MOCOSQ96EN8 888 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 RABEP2Q9H5N1 569 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 ZNF395Q9H8N7 513 aaPredicted RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 SLC6A20Q9NP91 592 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 TCF7L2Q9NQB0 619 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 TMEM45AQ9NWC5 275 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 CUEDC1Q9NWM3 386 aaPredicted RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 SOHLH2Q9NX45 425 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 PDP2Q9P2J9 529 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 DCTN4Q9UJW0 460 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 PLCL2Q9UPR0 1127 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 BTRCQ9Y297 605 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 WBP11Q9Y2W2 641 aaKnown RBP11.89□□□□□ -0.51
TPM1-209ENST00000558072 TIMM22Q9Y584 194 aa11.89□□□□□ -0.51
TPM1-209ENST00000558072 DNAH14Q0VDD8 3507 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 FFAR3O14843 346 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 PIP5K1BO14986 540 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 GPR42O15529 346 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 SKAP2O75563 359 aaPredicted RBP11.88□□□□□ -0.51
TPM1-209ENST00000558072 RFPL3O75679 317 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 PDYNP01213 254 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 ADSLP30566 484 aaPredicted RBP11.88□□□□□ -0.51
TPM1-209ENST00000558072 MLLT3P42568 568 aaPredicted RBP11.88□□□□□ -0.51
TPM1-209ENST00000558072 EMP3P54852 163 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 CCL7P80098 99 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 ACY1Q03154 408 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 NR6A1Q15406 480 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms