RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 LARP4Q71RC2 724 aaKnown RBP eCLIP16.17■□□□□ 0.18
SNX1-203ENST00000558040 MFSD9Q8NBP5 474 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 IFI44Q8TCB0 444 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 RHBDD1Q8TEB9 315 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 SERPINI1Q99574 410 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 DPYSL5Q9BPU6 564 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 CCDC3Q9BQI4 270 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 ACPTQ9BZG2 426 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 AKTIPQ9H8T0 292 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 DMRT3Q9NQL9 472 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 MRGBPQ9NV56 204 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 FTSJ1Q9UET6 329 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 KLHL20Q9Y2M5 609 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 MN1Q10571 1320 aaPredicted RBP16.17■□□□□ 0.18
SNX1-203ENST00000558040 MAGEB17A8MXT2 336 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 E9PBE3 544 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 DLL1O00548 723 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 LSM1O15116 133 aaKnown RBP16.16■□□□□ 0.18
SNX1-203ENST00000558040 KLHL41O60662 606 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 CLEC3AO75596 197 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 PVRP15151 417 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 CKMT2P17540 419 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 PRPH2P23942 346 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 CD1CP29017 333 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 BCL6P41182 706 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 LSSP48449 732 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 IRX1P78414 480 aaPredicted RBP16.16■□□□□ 0.18
SNX1-203ENST00000558040 MAD2L1Q13257 205 aaPredicted RBP16.16■□□□□ 0.18
SNX1-203ENST00000558040 SQSTM1Q13501 440 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 TUBB3Q13509 450 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 CLPPQ16740 277 aaPredicted RBP16.16■□□□□ 0.18
SNX1-203ENST00000558040 SMU1Q2TAY7 513 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 GALNTL6Q49A17 601 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 SPDYAQ5MJ70 313 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 PERM1Q5SV97 790 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 FCRL6Q6DN72 434 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 OGFOD2Q6N063 350 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 Q6ZSR9 355 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 ALYREFQ86V81 257 aaKnown RBP16.16■□□□□ 0.18
SNX1-203ENST00000558040 C19orf47Q8N9M1 422 aaKnown RBP16.16■□□□□ 0.18
SNX1-203ENST00000558040 TRPV3Q8NET8 790 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 OR2T11Q8NH01 316 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 METTL2AQ96IZ6 378 aaKnown RBP16.16■□□□□ 0.18
SNX1-203ENST00000558040 LRRC37BQ96QE4 947 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 MAP3K3Q99759 626 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 ZFYVE21Q9BQ24 234 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 LRTM1Q9HBL6 345 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 C1orf109Q9NX04 203 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 VPS29Q9UBQ0 182 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 ZFP69BQ9UJL9 534 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 SLC12A4Q9UP95 1085 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 CCL27Q9Y4X3 112 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 PCDHGA4Q9Y5G9 962 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 AP1M2Q9Y6Q5 423 aa16.16■□□□□ 0.18
SNX1-203ENST00000558040 COL5A1P20908 1838 aaPredicted RBP16.15■□□□□ 0.18
SNX1-203ENST00000558040 NPIPB8E9PQR5 432 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 UBDO15205 165 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 PEX11AO75192 247 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 RASSF9O75901 435 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 C9P02748 559 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 RPLP0P05388 317 aaKnown RBP16.15■□□□□ 0.18
SNX1-203ENST00000558040 SERPINA6P08185 405 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 PRR35P0CG20 571 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 ST6GAL1P15907 406 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 NCF2P19878 526 aaPredicted RBP16.15■□□□□ 0.18
SNX1-203ENST00000558040 PTX3P26022 381 aaPredicted RBP16.15■□□□□ 0.18
SNX1-203ENST00000558040 GFERP55789 205 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 RPS13P62277 151 aaKnown RBP16.15■□□□□ 0.18
SNX1-203ENST00000558040 ERVK-8P63133 956 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 HMGCS1Q01581 520 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 CYP4F3Q08477 520 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 AP5B1Q2VPB7 878 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 ZC3H12BQ5HYM0 836 aaKnown RBP16.15■□□□□ 0.18
SNX1-203ENST00000558040 RNF44Q7L0R7 432 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 SPATA19Q7Z5L4 167 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 PLD3Q8IV08 490 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 NAXDQ8IW45 347 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 PARP9Q8IXQ6 854 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 ANKRD53Q8N9V6 530 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 FNDC5Q8NAU1 212 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 CMTM7Q96FZ5 175 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 TCTN2Q96GX1 697 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 PPM1MQ96MI6 270 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 TRAPPC9Q96Q05 1148 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 CENPKQ9BS16 269 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 KLHL25Q9H0H3 589 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 LRRN3Q9H3W5 708 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 HCN4Q9Y3Q4 1203 aa16.15■□□□□ 0.18
SNX1-203ENST00000558040 ARID1BQ8NFD5 2236 aaPredicted RBP16.14■□□□□ 0.17
SNX1-203ENST00000558040 SLC9B1P1A6NJY1 282 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 LCMT2O60294 686 aaKnown RBP16.14■□□□□ 0.17
SNX1-203ENST00000558040 SEC22BO75396 215 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 ZBTB11O95625 1053 aaPredicted RBP16.14■□□□□ 0.17
SNX1-203ENST00000558040 CPNE6O95741 557 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 GP1BAP07359 652 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 CD59P13987 128 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 ACP1P24666 158 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 MAPK1P28482 360 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 CSF2RBP32927 897 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 CYP4F2P78329 520 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms