RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RIPK2O43353 540 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 LCMT2O60294 686 aaKnown RBP21.76■■□□□ 1.07
TDP1-216ENST00000556867 KERAO60938 352 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 IPO13O94829 963 aaKnown RBP21.76■■□□□ 1.07
TDP1-216ENST00000556867 WDR47O94967 919 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 SFTPCP11686 197 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 TYK2P29597 1187 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 MSH2P43246 934 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 IRF9Q00978 393 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 FAM53BQ14153 422 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 SSPNQ14714 243 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 RAB43Q86YS6 212 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 APLFQ8IW19 511 aaPredicted RBP21.76■■□□□ 1.07
TDP1-216ENST00000556867 CAMKVQ8NCB2 501 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 DCAKDQ8WVC6 231 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 KCTD4Q8WVF5 259 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 NXNL1Q96CM4 212 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 TM4SF19Q96DZ7 209 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 ATOH8Q96SQ7 321 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 DRC3Q9H069 523 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 CNOT10Q9H9A5 744 aaKnown RBP21.76■■□□□ 1.07
TDP1-216ENST00000556867 CD274Q9NZQ7 290 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 CTSFQ9UBX1 484 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 MED13Q9UHV7 2174 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 NXT1Q9UKK6 140 aaKnown RBP21.76■■□□□ 1.07
TDP1-216ENST00000556867 MAU2Q9Y6X3 613 aa21.76■■□□□ 1.07
TDP1-216ENST00000556867 POC1B-GALNT4F8VUJ3 575 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 PRPF4O43172 522 aaKnown RBP eCLIP21.75■■□□□ 1.07
TDP1-216ENST00000556867 FOXS1O43638 330 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 S100BP04271 92 aaPredicted RBP21.75■■□□□ 1.07
TDP1-216ENST00000556867 PRB1P04280 392 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 CNTFP26441 200 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 GDF5P43026 501 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 MAGEA12P43365 314 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 KCNC1P48547 511 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 REEP5Q00765 189 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 MEF2AQ02078 507 aaPredicted RBP21.75■■□□□ 1.07
TDP1-216ENST00000556867 KCNAB2Q13303 367 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 NKG7Q16617 165 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 NDUFA9Q16795 377 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 FAM83EQ2M2I3 478 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 NXPE4Q6UWF7 544 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 TMPRSS11BQ86T26 416 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 ASPGQ86U10 573 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 TBC1D19Q8N5T2 526 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 COL26A1Q96A83 441 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 SPSB2Q99619 263 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 SPNS1Q9H2V7 528 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 NUDT4Q9NZJ9 180 aa21.75■■□□□ 1.07
TDP1-216ENST00000556867 PTBP2Q9UKA9 531 aaKnown RBP21.75■■□□□ 1.07
TDP1-216ENST00000556867 BOD1L1Q8NFC6 3051 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 EXOC1LA0A1B0GW35 172 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 VSTM2BA6NLU5 285 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 C1QL1O75973 258 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 KRT38O76015 456 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 STATHP02808 62 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 UMODP07911 640 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 GNAZP19086 355 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 FBLP22087 321 aaKnown RBP21.74■■□□□ 1.07
TDP1-216ENST00000556867 TNFRSF8P28908 595 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 FOXL2P58012 376 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 CDC16Q13042 620 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 DSG2Q14126 1118 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 TMEM214Q6NUQ4 689 aaKnown RBP21.74■■□□□ 1.07
TDP1-216ENST00000556867 MRGPREQ86SM8 312 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 GSPT2Q8IYD1 628 aaKnown RBP21.74■■□□□ 1.07
TDP1-216ENST00000556867 ZNF740Q8NDX6 193 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 RHEBL1Q8TAI7 183 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 EXT2Q93063 718 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 IP6K3Q96PC2 410 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 AIF1LQ9BQI0 150 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 GPRC5BQ9NZH0 403 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 MRPS2Q9Y399 296 aaKnown RBP21.74■■□□□ 1.07
TDP1-216ENST00000556867 CFAP46Q8IYW2 2715 aa21.74■■□□□ 1.07
TDP1-216ENST00000556867 PCSK5Q92824 1860 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 IGLV3-12A0A075B6K2 115 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 OR1F1O43749 312 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 RFPL1O75677 317 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 STK16O75716 305 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 KLHL2O95198 593 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 SLC35G6P0C7Q6 338 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 MYBL2P10244 700 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 OTX2P32243 289 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 SCTRP47872 440 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 HSPA7P48741 367 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 SLCO4C1Q6ZQN7 724 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 AMER3Q8N944 861 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 SLC13A3Q8WWT9 602 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 CAPS2Q9BXY5 557 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 DNAJC11Q9NVH1 559 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 ZNF282Q9UDV7 671 aaPredicted RBP21.73■■□□□ 1.07
TDP1-216ENST00000556867 NUP210LQ5VU65 1888 aa21.73■■□□□ 1.07
TDP1-216ENST00000556867 A0A0A6YYC8 382 aaPredicted RBP21.72■■□□□ 1.07
TDP1-216ENST00000556867 SUPT3HB4E1H0 165 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 I3L1I5 382 aaPredicted RBP21.72■■□□□ 1.07
TDP1-216ENST00000556867 SUPT3HO75486 399 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 AHRP35869 848 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 SNRPNP63162 240 aaKnown RBP21.72■■□□□ 1.07
TDP1-216ENST00000556867 ATP1A4Q13733 1029 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 ACAP2Q15057 778 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms