RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 NT5CQ8TCD5 201 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 CCDC74BQ96LY2 380 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 PRAP1Q96NZ9 151 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 FRG2BQ96QU4 278 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 STRADBQ9C0K7 418 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 AKAP7Q9P0M2 348 aaPredicted RBP10.79□□□□□ -0.68
FOXN3-212ENST00000556541 TMEM9Q9P0T7 183 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 VTI1BQ9UEU0 232 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 ATXN7L1Q9ULK2 861 aaPredicted RBP10.79□□□□□ -0.68
FOXN3-212ENST00000556541 PLCL2Q9UPR0 1127 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 RNF11Q9Y3C5 154 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 TRAF6Q9Y4K3 522 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 ZFHX4Q86UP3 3567 aa10.79□□□□□ -0.68
FOXN3-212ENST00000556541 CNOT1A5YKK6 2376 aaKnown RBP10.79□□□□□ -0.68
FOXN3-212ENST00000556541 FITM1A5D6W6 292 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 H3BMH7 237 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 PPP6CO00743 305 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 HAT1O14929 419 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ZSCAN9O15535 394 aaPredicted RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ITM2AO43736 263 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 KIF1CO43896 1103 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 EDF1O60869 148 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 CTSVO60911 334 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 RASSF9O75901 435 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 OR4F21O95013 312 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 SEMA3DO95025 777 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 CHEK2O96017 543 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 MT-CO3P00414 261 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 CHRNGP07510 517 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 SERPINA6P08185 405 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ALOX15P16050 662 aaPredicted RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 PRPH2P23942 346 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 VARSP26640 1264 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 TSFMP43897 325 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 RPL14P50914 215 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 YBX1P67809 324 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 SIM1P81133 766 aaPredicted RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 CSTF3Q12996 717 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 IFT88Q13099 833 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 CUL3Q13618 768 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 IL11RAQ14626 422 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ZRSR2Q15696 482 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 RSPO4Q2I0M5 234 aaPredicted RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ADPRMQ3LIE5 342 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 GARNL3Q5VVW2 1013 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 NIPAL1Q6NVV3 410 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 IGF2-ASQ6U949 168 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ATG14Q6ZNE5 492 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 RPS27LQ71UM5 84 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 TRIM46Q7Z4K8 759 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 TRIM73Q86UV7 250 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 CRLF3Q8IUI8 442 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ZNF655Q8N720 491 aaPredicted RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 CAMKVQ8NCB2 501 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 PIWIL2Q8TC59 973 aaKnown RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 METTL6Q8TCB7 284 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 PPM1MQ96MI6 270 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ZNF317Q96PQ6 595 aaPredicted RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 C20orf27Q9GZN8 174 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ZMYND15Q9H091 742 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 SPNS1Q9H2V7 528 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 FANCEQ9HB96 536 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 FBXO8Q9NRD0 319 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 SIRT5Q9NXA8 310 aa10.78□□□□□ -0.68
FOXN3-212ENST00000556541 ZNF490Q9ULM2 529 aaPredicted RBP10.78□□□□□ -0.68
FOXN3-212ENST00000556541 CACNA1GO43497 2377 aa10.77□□□□□ -0.68
FOXN3-212ENST00000556541 KNTC1P50748 2209 aa10.77□□□□□ -0.68
FOXN3-212ENST00000556541 CCDC187A0A096LP49 1063 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 A0A1B0GTL3 188 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 MANBAO00462 879 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 ULK1O75385 1050 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 CAPN1P07384 714 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 FGF5P12034 268 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 PVRP15151 417 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 HMOX2P30519 316 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 CSTF2P33240 577 aaKnown RBP eCLIP10.77□□□□□ -0.69
FOXN3-212ENST00000556541 BCL6P41182 706 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 GCGRP47871 477 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 ID4P47928 161 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 ARL4DP49703 201 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 GUCY1A3Q02108 690 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 SMU1Q2TAY7 513 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 PRTGQ2VWP7 1150 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 TMEM35AQ53FP2 167 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 TLDC1Q6P9B6 456 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 VN1R4Q7Z5H5 301 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 MCATQ8IVS2 390 aaKnown RBP10.77□□□□□ -0.69
FOXN3-212ENST00000556541 CDYL2Q8N8U2 506 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 BMPERQ8N8U9 685 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 ANKRD53Q8N9V6 530 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 SRFBP1Q8NEF9 429 aaKnown RBP10.77□□□□□ -0.69
FOXN3-212ENST00000556541 CREB3L4Q8TEY5 395 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 ZNF473Q8WTR7 871 aaKnown RBP10.77□□□□□ -0.69
FOXN3-212ENST00000556541 CMTM7Q96FZ5 175 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 CMKLR1Q99788 373 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 ZPBPQ9BS86 351 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 MS4A8Q9BY19 250 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 NLNQ9BYT8 704 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
FOXN3-212ENST00000556541 ELOVL6Q9H5J4 265 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms