RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PRAMEF9Q5VWM5 478 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 FIGLAQ6QHK4 219 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 EPGNQ6UW88 154 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 FAM20CQ8IXL6 584 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 KLHDC8AQ8IYD2 350 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 GPR135Q8IZ08 494 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 BMPERQ8N8U9 685 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 CCDC197Q8NCU1 140 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 SLC5A11Q8WWX8 675 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 USP7Q93009 1102 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 ZNF578Q96N58 590 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-218ENST00000555213 SLC46A1Q96NT5 459 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 EBF4Q9BQW3 602 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 PLCD4Q9BRC7 762 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 TRIM55Q9BYV6 548 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 CD244Q9BZW8 370 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 SLC6A20Q9NP91 592 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 TMEM184CQ9NVA4 438 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 GPRC5BQ9NZH0 403 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 OPTCQ9UBM4 332 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 MARCOQ9UEW3 520 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-218ENST00000555213 DCTN4Q9UJW0 460 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 SERTAD3Q9UJW9 196 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 SLC22A14Q9Y267 594 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 KLHL20Q9Y2M5 609 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 ARL2BPQ9Y2Y0 163 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 ANGPTL3Q9Y5C1 460 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 USH1CQ9Y6N9 552 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 PTPRBP23467 1997 aa10.46□□□□□ -0.74
SHMT2-218ENST00000555213 CEP295Q9C0D2 2601 aa10.46□□□□□ -0.74
SHMT2-218ENST00000555213 KNTC1P50748 2209 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 A0A1W2PNU3 283 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 PMS2P1A4D2B8 440 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 OR2A25A4D2G3 310 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TMEM233B4DJY2 109 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CLGNO14967 610 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 NVLO15381 856 aaKnown RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CCNT2O60583 730 aaKnown RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 KATNA1O75449 491 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 OR2B3O76000 313 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 JUNP05412 331 aaKnown RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 FGF5P12034 268 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CDH1P12830 882 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 ETV5P41161 510 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 HSPA7P48741 367 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 AQP5P55064 265 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 FOXA1P55317 472 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 ITGA1P56199 1179 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CDC16Q13042 620 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 ZIC1Q15915 447 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 DEFB110Q30KQ9 67 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TBC1D25Q3MII6 688 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 VWA5B1Q5TIE3 1220 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 METTL2BQ6P1Q9 378 aaKnown RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 RNF44Q7L0R7 432 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TMPRSS11BQ86T26 416 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 SYVN1Q86TM6 617 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CUZD1Q86UP6 607 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TMEM126BQ8IUX1 230 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CACNA2D3Q8IZS8 1091 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TRPC4APQ8TEL6 797 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 AGAP11Q8TF27 550 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 RERGQ96A58 199 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 FCRL4Q96PJ5 515 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CTRCQ99895 268 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 ZFYVE21Q9BQ24 234 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TRMOQ9BU70 441 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TMEM120AQ9BXJ8 343 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 ULBP3Q9BZM4 244 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 SLC7A5P2Q9GIP4 190 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 NSRP1Q9H0G5 558 aaKnown RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CCDC86Q9H6F5 360 aaKnown RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 CUEDC1Q9NWM3 386 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TRAF6Q9Y4K3 522 aa10.45□□□□□ -0.74
SHMT2-218ENST00000555213 TMEM8BA6NDV4 472 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 E7EQ34 232 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 STMND1H3BQB6 276 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 H7BY64 318 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 K7EPI3 171 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 ZSCAN9O15535 394 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 PRAMEF10O60809 474 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 SNUPNO95149 360 aaKnown RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 EPB42P16452 691 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 NPPBP16860 134 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 CXCR2P25025 360 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 SLC5A2P31639 672 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 ARFIP2P53365 341 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 PCBP4P57723 403 aaKnown RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 RPS15AP62244 130 aaKnown RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 RELAQ04206 551 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 CYP4F3Q08477 520 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 SLC9B1Q4ZJI4 515 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 TCTE1Q5JU00 501 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 CFAP157Q5JU67 520 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 FCRL6Q6DN72 434 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 ZNF425Q6IV72 752 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 TLDC1Q6P9B6 456 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 UNQ6494/PRO21346Q6UXR6 183 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 GOLGA7Q7Z5G4 137 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms