RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 C16orf58Q96GQ5 468 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 GRAMD2BQ96HH9 432 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 NECTIN4Q96NY8 510 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 FNDC11Q9BVV2 318 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 PUS3Q9BZE2 481 aaKnown RBP4.91□□□□□ -1.62
VRK1-203ENST00000555067 DDX47Q9H0S4 455 aaKnown RBP4.91□□□□□ -1.62
VRK1-203ENST00000555067 DPAGT1Q9H3H5 408 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 GORASP2Q9H8Y8 452 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 RAB9BQ9NP90 201 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 RHCGQ9UBD6 479 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 ABT1Q9ULW3 272 aaKnown RBP4.91□□□□□ -1.62
VRK1-203ENST00000555067 U3KQV3 271 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 A0A1B0GVY2 172 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 A0A1W2PS18 150 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 TEX28O15482 410 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 FLRT2O43155 660 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 EDIL3O43854 480 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 CYTIPO60759 359 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 RAD51DO75771 328 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 EGFP01133 1207 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 CFC1BP0CG36 223 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 CFC1P0CG37 223 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 GLRA2P23416 452 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 PSMA5P28066 241 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 NPBWR1P48145 328 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 CNN1P51911 297 aaKnown RBP4.9□□□□□ -1.63
VRK1-203ENST00000555067 MAPK12P53778 367 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 GSDMDP57764 484 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 KRTAP10-3P60369 221 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 PRKCZQ05513 592 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 GPM6BQ13491 265 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 NEDD9Q14511 834 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 CYP4A22Q5TCH4 519 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 ZDHHC20Q5W0Z9 365 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 MFSD12Q6NUT3 480 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 C19orf48Q6RUI8 117 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 ZYG11AQ6WRX3 759 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 ZNF534Q76KX8 674 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 BEST3Q8N1M1 668 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 WDSUB1Q8N9V3 476 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 KIAA0895Q8NCT3 520 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 MOB3AQ96BX8 217 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 SLC22A12Q96S37 553 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 ATG101Q9BSB4 218 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 TPPP3Q9BW30 176 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 MTMR12Q9C0I1 747 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 MAGEF1Q9HAY2 307 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 MMP25Q9NPA2 562 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 PPANQ9NQ55 473 aaKnown RBP4.9□□□□□ -1.63
VRK1-203ENST00000555067 STK26Q9P289 416 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 C2CD2Q9Y426 696 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 TMEM184BQ9Y519 407 aaPredicted RBP4.9□□□□□ -1.63
VRK1-203ENST00000555067 NSD2O96028 1365 aa4.9□□□□□ -1.63
VRK1-203ENST00000555067 A0A087WZY1 265 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 MACROD2A1Z1Q3 448 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 E2F3O00716 465 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 CLDN3O15551 220 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 OR10H2O60403 315 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 LUC7L3O95232 432 aaKnown RBP4.89□□□□□ -1.63
VRK1-203ENST00000555067 KRT6BP04259 564 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 PCCBP05166 539 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 GZMAP12544 262 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 AKT2P31751 481 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 HSPA1LP34931 641 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 TAGLN2P37802 199 aaKnown RBP4.89□□□□□ -1.63
VRK1-203ENST00000555067 ATP5OP48047 213 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 KRT6CP48668 564 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 TRPC1P48995 793 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 ARHGAP1Q07960 439 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 COX10Q12887 443 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 PDZK1IP1Q13113 114 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 TSTA3Q13630 321 aaPredicted RBP4.89□□□□□ -1.63
VRK1-203ENST00000555067 GIT2Q14161 759 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 CTU2Q2VPK5 515 aaKnown RBP4.89□□□□□ -1.63
VRK1-203ENST00000555067 LACTB2Q53H82 288 aaPredicted RBP4.89□□□□□ -1.63
VRK1-203ENST00000555067 CES3Q6UWW8 571 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 PHLDB2Q86SQ0 1253 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 ASPGQ86U10 573 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 SATL1Q86VE3 508 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 NUDT13Q86X67 352 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 ZNF573Q86YE8 665 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 KLHDC8BQ8IXV7 354 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 RASGEF1AQ8N9B8 481 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 OR56B2PQ8NGI1 322 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 MAGEC3Q8TD91 643 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 SELENOMQ8WWX9 145 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 ESAMQ96AP7 390 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 CFAP36Q96G28 342 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 FAM81BQ96LP2 452 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 TCEANC2Q96MN5 208 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 EDEM2Q9BV94 578 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 RAB33BQ9H082 229 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 NAPBQ9H115 298 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 TFB2MQ9H5Q4 396 aaKnown RBP4.89□□□□□ -1.63
VRK1-203ENST00000555067 CDH20Q9HBT6 801 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 ZCCHC3Q9NUD5 404 aaKnown RBP4.89□□□□□ -1.63
VRK1-203ENST00000555067 NMRK1Q9NWW6 199 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 OSER1Q9NX31 292 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 C1RLQ9NZP8 487 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 CLIP2Q9UDT6 1046 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms