RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 HOXA2O43364 376 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 PRAMEF1O95521 474 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 RPLP0P05388 317 aaKnown RBP11.96□□□□□ -0.49
HDAC7-230ENST00000552960 ACVR2AP27037 513 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 SLC19A1P41440 591 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 CAMK2BQ13554 666 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 ATXN7L2Q5T6C5 722 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-230ENST00000552960 ZNF675Q8TD23 568 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 ZNF689Q96CS4 500 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-230ENST00000552960 DOCK6Q96HP0 2047 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 PSKH2Q96QS6 385 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 CDK5RAP1Q96SZ6 601 aaKnown RBP11.96□□□□□ -0.49
HDAC7-230ENST00000552960 MGME1Q9BQP7 344 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 BEX2Q9BXY8 128 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 ARL15Q9NXU5 204 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 N6AMT1Q9Y5N5 214 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 PRSS21Q9Y6M0 314 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 IGLV3-10A0A075B6K4 115 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 CLDN24A6NM45 220 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 CCRL2O00421 344 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 FPGTO14772 594 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 KRT6AP02538 564 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 KRT6BP04259 564 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 RHOCP08134 193 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 RRM2P31350 389 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 KDELR2P33947 212 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 KRT6CP48668 564 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 TUBA1BP68363 451 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 ELP6Q0PNE2 266 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 CDC20Q12834 499 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 INO80DQ53TQ3 878 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-230ENST00000552960 TUBA1AQ71U36 451 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 TMEM169Q96HH4 297 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 DEPDC7Q96QD5 511 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 TTYH2Q9BSA4 534 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 CD244Q9BZW8 370 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 KCNH6Q9H252 994 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 C11orf49Q9H6J7 331 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 SERHLQ9NQF3 203 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 BTBD3Q9Y2F9 522 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 ZNF840PA6NDX5 716 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 STK16O75716 305 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 NUDT7P0C024 238 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 POU1F1P28069 291 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 CA5AP35218 305 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 KIR3DL1P43629 444 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 CXCR4P61073 352 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 LINC00299Q6ZSB3 139 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 CLECL1Q8IZS7 167 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 SLC39A11Q8N1S5 342 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 LILRB4Q8NHJ6 448 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 YME1L1Q96TA2 773 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 TNKS2Q9H2K2 1166 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 RC3H2Q9HBD1 1191 aaKnown RBP11.96□□□□□ -0.5
HDAC7-230ENST00000552960 ADPRHL2Q9NX46 363 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 IMPAD1Q9NX62 359 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 PPT2Q9UMR5 302 aa11.96□□□□□ -0.5
HDAC7-230ENST00000552960 WBP11Q9Y2W2 641 aaKnown RBP11.96□□□□□ -0.5
HDAC7-230ENST00000552960 H7C4K7 107 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 EIF3FO00303 357 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-230ENST00000552960 PTHP01270 115 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 EIF2S1P05198 315 aaKnown RBP11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ZDHHC11BP0C7U3 371 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ZNF7P17097 686 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-230ENST00000552960 OR1E2P47887 323 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 BCL7AQ4VC05 210 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 NXNL2Q5VZ03 156 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ZNF605Q86T29 641 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 LACC1Q8IV20 430 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 APH1BQ8WW43 257 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 IPCEF1Q8WWN9 437 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-230ENST00000552960 APIPQ96GX9 242 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 FEVQ99581 238 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 MOV10Q9HCE1 1003 aaKnown RBP11.95□□□□□ -0.5
HDAC7-230ENST00000552960 GREB1Q4ZG55 1949 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 HAT1O14929 419 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 KMOO15229 486 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 EPN2O95208 641 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 CLDN9O95484 217 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 PTTG1O95997 202 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 SOD2P04179 222 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 MAPKAPK2P49137 400 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ST3GAL4Q11206 333 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ELAVL2Q12926 359 aaKnown RBP11.95□□□□□ -0.5
HDAC7-230ENST00000552960 VMACQ2NL98 169 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ZFP69Q49AA0 526 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ARMC4Q5T2S8 1044 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 PNCKQ6P2M8 343 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 NRARPQ7Z6K4 114 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 TMEM150AQ86TG1 271 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 FAM217AQ8IXS0 508 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ZNF461Q8TAF7 563 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 FBLIM1Q8WUP2 373 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 NEDD4LQ96PU5 975 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 PDFQ9HBH1 243 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 ZNF334Q9HCZ1 680 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-230ENST00000552960 CRLS1Q9UJA2 301 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 YIPF1Q9Y548 306 aa11.95□□□□□ -0.5
HDAC7-230ENST00000552960 PCDHGA6Q9Y5G7 932 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms