RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 RPS18P62269 152 aaKnown RBP5.02□□□□□ -1.61
CPSF6-206ENST00000550987 ASIC1P78348 528 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 ZNF155Q12901 538 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-206ENST00000550987 PRKAA1Q13131 559 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 TNK1Q13470 666 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 CUL3Q13618 768 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 ITGA7Q13683 1181 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 GTF2H2Q13888 395 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 VEZF1Q14119 521 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 CDO1Q16878 200 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 KBTBD12Q3ZCT8 623 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 NDUFAF5Q5TEU4 345 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 OR7E24Q6IFN5 339 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 C11orf63Q6NUN7 778 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 GTF2H2CQ6P1K8 395 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 PLBD1Q6P4A8 553 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 RHBDF2Q6PJF5 856 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 TMEM182Q6ZP80 229 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-206ENST00000550987 C15orf39Q6ZRI6 1047 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 Q75L30 129 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 KCTD9Q7L273 389 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 NUP54Q7Z3B4 507 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 PTOV1Q86YD1 416 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 RYBPQ8N488 228 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-206ENST00000550987 NEXN-AS1Q8NBZ9 246 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 FAM216AQ8WUB2 273 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 SCMH1Q96GD3 660 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 TMEM19Q96HH6 336 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 NEURL2Q9BR09 285 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 BTBD10Q9BSF8 475 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 PRRG4Q9BZD6 226 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 TUFT1Q9NNX1 390 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 SMARCAL1Q9NZC9 954 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 AKAP7Q9P0M2 348 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-206ENST00000550987 TRPC4Q9UBN4 977 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 FBXL5Q9UKA1 691 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 ACAD8Q9UKU7 415 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 ARAP2Q8WZ64 1704 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 FLNCQ14315 2725 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 JMJD1CQ15652 2540 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 USP9YO00507 2555 aaPredicted RBP5.01□□□□□ -1.61
CPSF6-206ENST00000550987 IGLV5-52A0A0A0MRZ9 124 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 C5orf52A6NGY3 159 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 ST8SIA3O43173 380 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 PPFIA2O75334 1257 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 IGHV2-70P01814 119 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 CRYABP02511 175 aaKnown RBP5.01□□□□□ -1.61
CPSF6-206ENST00000550987 TFAP2AP05549 437 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 NME5P56597 212 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 PTENP60484 403 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 DLK1P80370 383 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 SSBP2P81877 361 aaPredicted RBP5.01□□□□□ -1.61
CPSF6-206ENST00000550987 Q0VFX4 171 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 MYBPHQ13203 477 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 KLF9Q13886 244 aaPredicted RBP5.01□□□□□ -1.61
CPSF6-206ENST00000550987 VGLL4Q14135 290 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 ZNF234Q14588 700 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 SMC1AQ14683 1233 aaKnown RBP5.01□□□□□ -1.61
CPSF6-206ENST00000550987 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 MCMDC2Q4G0Z9 681 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 IRAK1BP1Q5VVH5 260 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 TMEM270Q6UE05 265 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 RAD9BQ6WBX8 426 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 NRARPQ7Z6K4 114 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 NDUFAF2Q8N183 169 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 ARHGAP24Q8N264 748 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 TRIML1Q8N9V2 468 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 NCOA7Q8NI08 942 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 SLC20A1Q8WUM9 679 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 CCDC107Q8WV48 283 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 ASB5Q8WWX0 329 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 RAD54LQ92698 747 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 SORCS2Q96PQ0 1159 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 TESK2Q96S53 571 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 TRAF4Q9BUZ4 470 aaPredicted RBP5.01□□□□□ -1.61
CPSF6-206ENST00000550987 C1QTNF7Q9BXJ2 289 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 DEFB129Q9H1M3 183 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 MFSD1Q9H3U5 465 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 THAP9Q9H5L6 903 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 TRPC7Q9HCX4 862 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 SERINC1Q9NRX5 453 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 CNIH4Q9P003 139 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 B3GAT1Q9P2W7 334 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 GMEB2Q9UKD1 530 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 ODF2LQ9ULJ1 636 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 STX8Q9UNK0 236 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 VDAC3Q9Y277 283 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 PDZD2O15018 2839 aa5.01□□□□□ -1.61
CPSF6-206ENST00000550987 NBEAL2Q6ZNJ1 2754 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 A0A0G2JPF8 293 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 A0A1B0GUL7 405 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 FEZF1A0PJY2 475 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 SMIM30A4D0T7 59 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 HNRNPCL3B7ZW38 293 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 PI15O43692 258 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 WDR1O75083 606 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 RTN2O75298 545 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 RPS6KA5O75582 802 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 LIPFP07098 398 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 FAM106CPP0CH98 169 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms