RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ASB1Q9Y576 335 aa16.04■□□□□ 0.16
CCDC38-203ENST00000546803 PCDHGA6Q9Y5G7 932 aa16.04■□□□□ 0.16
CCDC38-203ENST00000546803 ACACBO00763 2458 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 C9J4A7 227 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 TERTO14746 1132 aaKnown RBP16.03■□□□□ 0.16
CCDC38-203ENST00000546803 KATNA1O75449 491 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 ONECUT2O95948 504 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 CD63P08962 238 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 RAB40ALP0C0E4 278 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 SLC35G6P0C7Q6 338 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 KRT4P19013 534 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 EPORP19235 508 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 CASP2P42575 452 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 MEF2AQ02078 507 aaPredicted RBP16.03■□□□□ 0.16
CCDC38-203ENST00000546803 IRF8Q02556 426 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 SLC18A2Q05940 514 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 LAPTM5Q13571 262 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 PWP1Q13610 501 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 NKAIN1Q4KMZ8 207 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 XKR6Q5GH73 641 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 PAGE2BQ5JRK9 111 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 C1orf189Q5VU69 101 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 PRMT9Q6P2P2 845 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 TEX9Q8N6V9 391 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 ZSCAN1Q8NBB4 408 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 ZNF740Q8NDX6 193 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 TTLQ8NG68 377 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 HNRNPLLQ8WVV9 542 aaKnown RBP16.03■□□□□ 0.16
CCDC38-203ENST00000546803 SLC13A3Q8WWT9 602 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 PHF21BQ96EK2 531 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 SEC16BQ96JE7 1060 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 SLC45A3Q96JT2 553 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 EFCAB11Q9BUY7 163 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 GEMIN8Q9NWZ8 242 aaKnown RBP16.03■□□□□ 0.16
CCDC38-203ENST00000546803 COPG2Q9UBF2 871 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 NDOR1Q9UHB4 597 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 ZFP69BQ9UJL9 534 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 GRID1Q9ULK0 1009 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 CDC14AQ9UNH5 594 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 APC2O95996 2303 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 ADAMTS20P59510 1910 aa16.03■□□□□ 0.16
CCDC38-203ENST00000546803 AKAP13Q12802 2813 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 COPEO14579 308 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 P2RX6O15547 441 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 EFSO43281 561 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 SBK3P0C264 359 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 VARSP26640 1264 aaKnown RBP16.02■□□□□ 0.16
CCDC38-203ENST00000546803 RPS15P62841 145 aaKnown RBP16.02■□□□□ 0.16
CCDC38-203ENST00000546803 NFKB2Q00653 900 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 RGS1Q08116 209 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 ZNF844Q08AG5 666 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 VAC14Q08AM6 782 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 CHIT1Q13231 466 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 FAM53BQ14153 422 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 DOC2AQ14183 400 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 E2F2Q14209 437 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 SLBPQ14493 270 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCDC38-203ENST00000546803 RBBP5Q15291 538 aaKnown RBP16.02■□□□□ 0.16
CCDC38-203ENST00000546803 HIST2H2ACQ16777 129 aaPredicted RBP16.02■□□□□ 0.16
CCDC38-203ENST00000546803 HKDC1Q2TB90 917 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 KRT71Q3SY84 523 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 CCDC153Q494R4 210 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 BEND6Q5SZJ8 279 aaPredicted RBP16.02■□□□□ 0.16
CCDC38-203ENST00000546803 HIST2H2AA3Q6FI13 130 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 C16orf46Q6P387 395 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 FAM199XQ6PEV8 388 aaPredicted RBP16.02■□□□□ 0.16
CCDC38-203ENST00000546803 TMIGD1Q6UXZ0 262 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 TRABD2AQ86V40 505 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 ARHGEF39Q8N4T4 335 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 TRPV3Q8NET8 790 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 SNRNP27Q8WVK2 155 aaKnown RBP16.02■□□□□ 0.16
CCDC38-203ENST00000546803 UBE2E3Q969T4 207 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 C10orf90Q96M02 699 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 SPNS1Q9H2V7 528 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 MKS1Q9NXB0 559 aa16.02■□□□□ 0.16
CCDC38-203ENST00000546803 TPRP12270 2363 aaKnown RBP16.02■□□□□ 0.15
CCDC38-203ENST00000546803 URB1O60287 2271 aaKnown RBP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 A8MT66 165 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 FOXO6A8MYZ6 492 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 K7ENP7 123 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 E2F3O00716 465 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 PRPF4O43172 522 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 CTIFO43310 598 aaKnown RBP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 UGDHO60701 494 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 PRAMEF4O60810 478 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 WFS1O76024 890 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 SIX3O95343 332 aaPredicted RBP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 RECKO95980 971 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 F8A1P23610 371 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 ATP5F1P24539 256 aaPredicted RBP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 PTPN4P29074 926 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 EEF1DP29692 281 aaKnown RBP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 MC1RQ01726 317 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 SRSF6Q13247 344 aaKnown RBP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 GTF2H2Q13888 395 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 CRTC2Q53ET0 693 aaPredicted RBP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 PRAMEF9Q5VWM5 478 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 LCN10Q6JVE6 187 aa16.01■□□□□ 0.15
CCDC38-203ENST00000546803 TMEM214Q6NUQ4 689 aaKnown RBP16.01■□□□□ 0.15
CCDC38-203ENST00000546803 GTF2H2CQ6P1K8 395 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms