RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 TNFRSF21O75509 655 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ACLYP53396 1101 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 RPS13P62277 151 aaKnown RBP12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 CD83Q01151 205 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 SETMARQ53H47 684 aaPredicted RBP12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 GPRC6AQ5T6X5 926 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ATG9BQ674R7 924 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ZNF57Q68EA5 555 aaPredicted RBP12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 LIMS2Q7Z4I7 341 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 SCAIQ8N9R8 606 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 AQP11Q8NBQ7 271 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ASZ1Q8WWH4 475 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 TP53INP1Q96A56 240 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 EXOSC8Q96B26 276 aaKnown RBP12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ARMC5Q96C12 935 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 GPN2Q9H9Y4 310 aaPredicted RBP12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ACOT13Q9NPJ3 140 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ZNF221Q9UK13 617 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 A0A1W2PRU2 124 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 DRGXA6NNA5 263 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 J3KTA2 159 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 CTDSP2O14595 271 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 HPRP00739 348 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ALPPL2P10696 532 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ATF6P18850 670 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 CD40LGP29965 261 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 PPP2R2BQ00005 443 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 MC1RQ01726 317 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 ADNP2Q6IQ32 1131 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 MRPL10Q7Z7H8 261 aaKnown RBP12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 WFDC5Q8TCV5 224 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 CYB5D2Q8WUJ1 264 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 DNASE1L2Q92874 299 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 DIRAS2Q96HU8 199 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 DYRK4Q9NR20 520 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 C5AR2Q9P296 337 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 LYVE1Q9Y5Y7 322 aa12.8□□□□□ -0.36
PCMTD1-208ENST00000544451 FAM25AB3EWG3 89 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 FAM25CB3EWG5 89 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 FAM25GB3EWG6 89 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 KLK1P06870 262 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 CTSOP43234 321 aaPredicted RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 CLK3P49761 638 aaKnown RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 CLDN8P56748 225 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 EXOC3L2Q2M3D2 409 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 RIMKLAQ8IXN7 391 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 KAT2AQ92830 837 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 PEX13Q92968 403 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 SLC38A4Q969I6 547 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 TTYH2Q9BSA4 534 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 POLR2J2Q9GZM3 115 aaKnown RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 FAM83DQ9H4H8 585 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 GORASP2Q9H8Y8 452 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 AP3M1Q9Y2T2 418 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 ASCC3Q8N3C0 2202 aaKnown RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 ARNTLO00327 626 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 ACRV1P26436 265 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 LIPAP38571 399 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 MANFP55145 182 aaKnown RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 AP1S1P61966 158 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 NKX3-2P78367 333 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 MAD2L1BPQ15013 274 aaPredicted RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 SF3B4Q15427 424 aaKnown RBP eCLIP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 MORN1Q5T089 497 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 NCEH1Q6PIU2 408 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 RTN4RL1Q86UN2 441 aaPredicted RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 RNF130Q86XS8 419 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 TRNT1Q96Q11 434 aaKnown RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 EQTNQ9NQ60 294 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 MRPL17Q9NRX2 175 aaKnown RBP12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 B4GALT6Q9UBX8 382 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 ATP6V1HQ9UI12 483 aa12.79□□□□□ -0.36
PCMTD1-208ENST00000544451 E7EQ34 232 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 KIAA0513O60268 411 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 EOMESO95936 686 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 ITIH1P19827 911 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 CCR7P32248 378 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 SRSF11Q05519 484 aaKnown RBP12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 SCARB2Q14108 478 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 IFI44LQ53G44 452 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 AFMIDQ63HM1 303 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 GPR149Q86SP6 731 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 ZZZ3Q8IYH5 903 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 ALDH16A1Q8IZ83 802 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 DEPDC4Q8N2C3 294 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 ELMOD1Q8N336 334 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 C19orf18Q8NEA5 215 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 P2RY13Q9BPV8 354 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 NLNQ9BYT8 704 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 ZDHHC4Q9NPG8 344 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 CDH7Q9ULB5 785 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 PLAGL1Q9UM63 463 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 MRPS7Q9Y2R9 242 aaKnown RBP12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 PCDHGA12O60330 932 aa12.78□□□□□ -0.36
PCMTD1-208ENST00000544451 PSIP1O75475 530 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms