RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TM4SF5O14894 197 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 ZW10O43264 779 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 CTSVO60911 334 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 RASSF9O75901 435 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 STATHP02808 62 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 JUNP05412 331 aaKnown RBP8.95□□□□□ -0.98
DDX55-208ENST00000541259 GP1BAP07359 652 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 FGF4P08620 206 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 BCL6P41182 706 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 HNF4AP41235 474 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 HTR6P50406 440 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 RPL14P50914 215 aaKnown RBP8.95□□□□□ -0.98
DDX55-208ENST00000541259 NEK2P51955 445 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 REEP5Q00765 189 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 COL9A2Q14055 689 aaPredicted RBP8.95□□□□□ -0.98
DDX55-208ENST00000541259 RBBP5Q15291 538 aaKnown RBP8.95□□□□□ -0.98
DDX55-208ENST00000541259 ZRSR2Q15696 482 aaKnown RBP8.95□□□□□ -0.98
DDX55-208ENST00000541259 GGTA1PQ4G0N0 100 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 SGO1Q5FBB7 561 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 KANK2Q63ZY3 851 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 CGB2Q6NT52 195 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 VN1R5Q7Z5H4 357 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 MTERF4Q7Z6M4 381 aaKnown RBP8.95□□□□□ -0.98
DDX55-208ENST00000541259 CRLF3Q8IUI8 442 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 CLYBLQ8N0X4 340 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 ANKRD53Q8N9V6 530 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 METTL6Q8TCB7 284 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 ZUFSPQ96AP4 578 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 GRAMD1AQ96CP6 724 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 C7orf26Q96N11 449 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 GFM1Q96RP9 751 aaKnown RBP8.95□□□□□ -0.98
DDX55-208ENST00000541259 HBEGFQ99075 208 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 TUBB1Q9H4B7 451 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 EHD1Q9H4M9 534 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 RABEP2Q9H5N1 569 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 C1GALT1Q9NS00 363 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 HAO1Q9UJM8 370 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 PILRAQ9UKJ1 303 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 BTRCQ9Y297 605 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.95□□□□□ -0.98
DDX55-208ENST00000541259 KLK4Q9Y5K2 254 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 PTGDR2Q9Y5Y4 395 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 CCDC88CQ9P219 2028 aa8.95□□□□□ -0.98
DDX55-208ENST00000541259 FER1L5A0AVI2 2057 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 LOC105369274A0A096LPK9 316 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 LOC102723532A0A0G2JNH3 316 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 A0A0J9YVX5 310 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 D6RAR5 112 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 H0YIV9 168 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 ZNF195O14628 629 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 GIPC1O14908 333 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 SIAH2O43255 324 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 OR1F1O43749 312 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 UGDHO60701 494 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 SH3BGRLO75368 114 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 SKAP2O75563 359 aaPredicted RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 CRCPO75575 148 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 RFPL3O75679 317 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 FKBP9O95302 570 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 PDYNP01213 254 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 ENO1P06733 434 aaKnown RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 CTSBP07858 339 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 UROSP10746 265 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 PCNAP12004 261 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 HRH2P25021 359 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 HMOX2P30519 316 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 INSM1Q01101 510 aaPredicted RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 CYP4F3Q08477 520 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 LAPTM5Q13571 262 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 DDX39BQ13838 428 aaKnown RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 SPIDRQ14159 915 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 KCNAB1Q14722 419 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 ABRAXAS2Q15018 415 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 PDCD2Q16342 344 aaPredicted RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 HIST2H2ACQ16777 129 aaPredicted RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 DEFB110Q30KQ9 67 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 HIST2H2AA3Q6FI13 130 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 FRMPD2BQ6IN97 320 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 TMIGD1Q6UXZ0 262 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 MAVSQ7Z434 540 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 B3GNT8Q7Z7M8 397 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 GLRX5Q86SX6 157 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 SLITRK4Q8IW52 837 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 WDR75Q8IWA0 830 aaKnown RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 LAS2Q8IYD9 372 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 OR4N4Q8N0Y3 316 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 KRT78Q8N1N4 520 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 DNAJC22Q8N4W6 341 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 C19orf47Q8N9M1 422 aaKnown RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 RCBTB1Q8NDN9 531 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 OR7G3Q8NG95 312 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 OR4D9Q8NGE8 314 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 SNIP1Q8TAD8 396 aaKnown RBP8.94□□□□□ -0.98
DDX55-208ENST00000541259 WDR20Q8TBZ3 569 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 NETO1Q8TDF5 533 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 KLHL6Q8WZ60 621 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 CHMP6Q96FZ7 201 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 PPP1R36Q96LQ0 422 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 CCDC74BQ96LY2 380 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 CD180Q99467 661 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms