RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ST3GAL4Q11206 333 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 CHIT1Q13231 466 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 MAD2L1Q13257 205 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 MED22Q15528 200 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 LEXMQ3ZCV2 418 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZC3H12BQ5HYM0 836 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 C7orf34Q96L11 122 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 CTRCQ99895 268 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 NTMT1Q9BV86 223 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 FBXL12Q9NXK8 326 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 FZD4Q9ULV1 537 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 TMA7Q9Y2S6 64 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 TMED5Q9Y3A6 229 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 A0A1B0GVM2 712 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 H7C0S8 307 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 ASNA1O43681 348 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 SCN2BO60939 215 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 EPN2O95208 641 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 ANXA5P08758 320 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 AMD1P17707 334 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 ITGALP20701 1170 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 OR1D2P34982 312 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 PIK3CBP42338 1070 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 CTSOP43234 321 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 NKX3-2P78367 333 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 IL18R1Q13478 541 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 MRPL58Q14197 206 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 PROX2Q3B8N5 592 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 TPGS1Q6ZTW0 290 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 STK40Q8N2I9 435 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 NELL1Q92832 810 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 SIGLEC11Q96RL6 698 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 EMILIN2Q9BXX0 1053 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 PRRG3Q9BZD7 231 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 TPT1P8Q9HAU6 139 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 NEK6Q9HC98 313 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZNF226Q9NYT6 803 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 TRPS1Q9UHF7 1281 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 SLC45A1Q9Y2W3 748 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 UGT2A1Q9Y4X1 527 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 RGS5O15539 181 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 CCNKO75909 580 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZDHHC11BP0C7U3 371 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 HLA-EP13747 358 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 SOX3P41225 446 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 TSTQ16762 297 aaKnown RBP10□□□□□ -0.81
CDC42SE1-207ENST00000540998 PLEKHG6Q3KR16 790 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 POM121L1PQ3SYA9 428 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 BCL7AQ4VC05 210 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 MMP21Q8N119 569 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 OR8H2Q8N162 312 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 DNAJC22Q8N4W6 341 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 MED8Q96G25 268 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 NECTIN4Q96NY8 510 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 IL4I1Q96RQ9 567 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 SDHCQ99643 169 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-207ENST00000540998 CCM2Q9BSQ5 444 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 TSEN34Q9BSV6 310 aaKnown RBP10□□□□□ -0.81
CDC42SE1-207ENST00000540998 EXOSC4Q9NPD3 245 aaKnown RBP10□□□□□ -0.81
CDC42SE1-207ENST00000540998 MS4A12Q9NXJ0 267 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 SPATA7Q9P0W8 599 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 KLHL3Q9UH77 587 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 MAN2B2Q9Y2E5 1009 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 PCDHB1Q9Y5F3 818 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 KCNE1BA0A087WTH5 132 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 OR2AG2A6NM03 316 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 E7EQ34 232 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 PCDH17O14917 1159 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 KIAA0513O60268 411 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 NUAK1O60285 661 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 SEMG1P04279 462 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 AOAHP28039 575 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 CRATP43155 626 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 MAGEA11P43364 429 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 MC1RQ01726 317 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 MXD1Q05195 221 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 DMC1Q14565 340 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 DUOXA1Q1HG43 343 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 EXOC3L2Q2M3D2 409 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 FUT10Q6P4F1 479 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 NRARPQ7Z6K4 114 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 HMGN2P46Q86SG4 172 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 STX19Q8N4C7 294 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZNF486Q96H40 463 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-207ENST00000540998 SLC32A1Q9H598 525 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 DDX28Q9NUL7 540 aaKnown RBP10□□□□□ -0.81
CDC42SE1-207ENST00000540998 SH3BP4Q9P0V3 963 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 PSORS1C1Q9UIG5 152 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 PCDHGB6Q9Y5F9 930 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 MYO15AQ9UKN7 3530 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 SOX14O95416 240 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 FHP07954 510 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 CKBP12277 381 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 DAB2P98082 770 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 SPIBQ01892 262 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 GPR17Q13304 367 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 CDH18Q13634 790 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 HECTD3Q5T447 861 aa10□□□□□ -0.81
CDC42SE1-207ENST00000540998 ADGRF1Q5T601 910 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms