RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TNFSF8P32971 234 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 CDH4P55283 916 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 SMARCB1Q12824 385 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 SLAMF1Q13291 335 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 DDX39BQ13838 428 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 FAM110CQ1W6H9 321 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 SMU1Q2TAY7 513 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 C10orf62Q5T681 223 aaPredicted RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 ADNP2Q6IQ32 1131 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 NCEH1Q6PIU2 408 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 FUBP3Q96I24 572 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 CEP295NLQ96MC4 621 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 MMP28Q9H239 520 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 OLA1Q9NTK5 396 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 OGDHLQ9ULD0 1010 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 AOC2O75106 756 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 APOA1P02647 267 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 COX7A2P14406 83 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 RFX2P48378 723 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 RING1Q06587 406 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 PPIGQ13427 754 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 DSC3Q14574 896 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 BAK1Q16611 211 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 MORN1Q5T089 497 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 SYT12Q8IV01 421 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 PAF1Q8N7H5 531 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 TRNT1Q96Q11 434 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 MTERF1Q99551 399 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 TMEM246Q9BRR3 403 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 BBS2Q9BXC9 721 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 ATG10Q9H0Y0 220 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 TPT1P8Q9HAU6 139 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 FKBP14Q9NWM8 211 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 CCDC59Q9P031 241 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 FZD4Q9ULV1 537 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 SLC22A14Q9Y267 594 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 PEX16Q9Y5Y5 336 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 VWA8A3KMH1 1905 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 PRAMEF25A6NGN4 478 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 TNFRSF11BO00300 401 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 MRPS14O60783 128 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 CDH12P55289 794 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 DEFA1P59665 94 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 DEFA3P59666 94 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 ZNF177Q13360 481 aaPredicted RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 CHRNA6Q15825 494 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 CLPPQ16740 277 aaPredicted RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 Q5BKY6 102 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 CLLU1OSQ5K130 101 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 ZNF605Q86T29 641 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 RBFAQ8N0V3 343 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 UBE2J2Q8N2K1 259 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 ASCC1Q8N9N2 400 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 GPR62Q9BZJ7 368 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 OR2B2Q9GZK3 357 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 PAQR5Q9NXK6 330 aaPredicted RBP13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 TAS2R9Q9NYW1 312 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 NDUFAF4Q9P032 175 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 RAPGEFL1Q9UHV5 662 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 NOTOA8MTQ0 251 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 PCDH7O60245 1069 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 GPX5O75715 221 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 PRPS2P11908 318 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 DMC1Q14565 340 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 PTCHD3Q3KNS1 767 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 ZFP69Q49AA0 526 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 ANGPTL8Q6UXH0 198 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 NAGSQ8N159 534 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 OR10G2Q8NGC3 310 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 GPR151Q8TDV0 419 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 GTPBP3Q969Y2 492 aaKnown RBP13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 CEP19Q96LK0 163 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 COPS8Q99627 209 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 CNPPD1Q9BV87 410 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 BARHL1Q9BZE3 327 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 SLC32A1Q9H598 525 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 EXOSC4Q9NPD3 245 aaKnown RBP13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 LHX3Q9UBR4 397 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 PCDHGA2Q9Y5H1 932 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 KCNE1BA0A087WTH5 132 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 ARHGAP33O14559 1287 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 SUV39H1O43463 412 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 HLA-EP13747 358 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 GABRB1P18505 474 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 SOX3P41225 446 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 GAB1Q13480 694 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 GPR50Q13585 617 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 SSX1Q16384 188 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 CXorf57Q6NSI4 855 aaKnown RBP13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 RTN4RL1Q86UN2 441 aaPredicted RBP13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 GALNT12Q8IXK2 581 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 SYNPOQ8N3V7 929 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 DNAJB8Q8NHS0 232 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 UROC1Q96N76 676 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 COL21A1Q96P44 957 aa13.44□□□□□ -0.26
SCNN1A-215ENST00000540037 MCCC1Q96RQ3 725 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms