RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 DNMT3BQ9UBC3 853 aaKnown RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 PEX16Q9Y5Y5 336 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 OAS3Q9Y6K5 1087 aaKnown RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 MIA3Q5JRA6 1907 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 PGRMC2O15173 223 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 B4GAT1O43505 415 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 GNAO1P09471 354 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 PRKAR1AP10644 381 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 C4BPBP20851 252 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 HNF1BP35680 557 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SMIM11AP58511 58 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 TAS2R41P59536 307 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 TYSND1Q2T9J0 566 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 HKDC1Q2TB90 917 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 GCNT6Q5T4J0 391 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 C22orf39Q6P5X5 142 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM207Q6UWW9 146 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SERPINA13PQ6UXR4 307 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 Q6ZVU0 165 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 OR52B6Q8NGF0 335 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SMG7Q92540 1137 aaKnown RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 CLIP3Q96DZ5 547 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SLC45A3Q96JT2 553 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 WRAP53Q9BUR4 548 aaKnown RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF696Q9H7X3 374 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ING3Q9NXR8 418 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SLCO3A1Q9UIG8 710 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 GREB1Q4ZG55 1949 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 CPSF4LA6NMK7 179 aaKnown RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 PPP6CO00743 305 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 INMTO95050 263 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SRCP12931 536 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 HLA-FP30511 346 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 IRS1P35568 1242 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 HMGCLP35914 325 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 RPL3P39023 403 aaKnown RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 NSG1P42857 185 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ASMTP46597 345 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 MYBPC1Q00872 1141 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 OR4D1Q15615 310 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF557Q8N988 423 aaPredicted RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 OR10G2Q8NGC3 310 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SUSD6Q92537 303 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ZUFSPQ96AP4 578 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 PKP4Q99569 1192 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SUV39H2Q9H5I1 410 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 IL17CQ9P0M4 197 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 OR51B4Q9Y5P0 310 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 FABP12A6NFH5 140 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 M0QX08 132 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 SLC9A3R1O14745 358 aaPredicted RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 OR5F1O95221 314 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 POP4O95707 220 aaKnown RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TGFB1P01137 390 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TFAP2AP05549 437 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CCNYL3P0C7X3 344 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 PMS2P3Q13401 168 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 UAP1L1Q3KQV9 507 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CYP27C1Q4G0S4 372 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CRTC2Q53ET0 693 aaPredicted RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 IFI44LQ53G44 452 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 C6orf141Q5SZD1 244 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 ANKRD26P1Q6NSI1 321 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 LAPTM4BQ86VI4 370 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM151AQ8N4L1 468 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 OR52L1Q8NGH7 329 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 AP3S1Q92572 193 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 AP2M1Q96CW1 435 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 YTHDF1Q9BYJ9 559 aaKnown RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 POPDC3Q9HBV1 291 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 SPHK2Q9NRA0 654 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 IMP3Q9NV31 184 aaKnown RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TUBA8Q9NY65 449 aaPredicted RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF451Q9Y4E5 1061 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 PCDHGB3Q9Y5G1 929 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TARM1B6A8C7 271 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 SCAMP1O15126 338 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 SOCS5O75159 536 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 PRAMEF12O95522 483 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 NUDT14O95848 222 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 MYOGP15173 224 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CXCR2P25025 360 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 MAP2K4P45985 399 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 CLCN4P51793 760 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TPRG1LQ5T0D9 272 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 GOLGA7Q7Z5G4 137 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 GALNT10Q86SR1 603 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 C17orf64Q86WR6 236 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM126BQ8IUX1 230 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 LSMEM2Q8N112 164 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 LGI4Q8N135 537 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 FZD4Q9ULV1 537 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 BRWD1Q9NSI6 2320 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 SH3PXD2BA1X283 911 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 LINC01553A4QN01 128 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 A8MV72 311 aaPredicted RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 ISM1B1AKI9 464 aa9.67□□□□□ -0.86
TRAF1-202ENST00000540010 TPD52L2O43399 206 aaKnown RBP9.67□□□□□ -0.86
TRAF1-202ENST00000540010 RPN2P04844 631 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms