RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 RETREG3Q86VR2 466 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 NRROSQ86YC3 692 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 FBXL6Q8N531 539 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 LMNTD1Q8N9Z9 388 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 MFSD2AQ8NA29 543 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 ZBTB8BQ8NAP8 495 aaPredicted RBP16.24■□□□□ 0.19
COPS3-212ENST00000539941 ZFPM2Q8WW38 1151 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 HOPXQ9BPY8 73 aaPredicted RBP16.24■□□□□ 0.19
COPS3-212ENST00000539941 AIF1LQ9BQI0 150 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 DPY30Q9C005 99 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 NT5DC2Q9H857 520 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 ICKQ9UPZ9 632 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 RUVBL1Q9Y265 456 aaKnown RBP16.24■□□□□ 0.19
COPS3-212ENST00000539941 PCDHB11Q9Y5F2 797 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 MAGEB17A8MXT2 336 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 SCAMP1O15126 338 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 CFLARO15519 480 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 NPPAP01160 153 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 IL12AP29459 219 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 SHMT2P34897 504 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 ACSM2AQ08AH3 577 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 DDX39BQ13838 428 aaKnown RBP16.24■□□□□ 0.19
COPS3-212ENST00000539941 ADRM1Q16186 407 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 SPIN4Q56A73 249 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 ACSM2BQ68CK6 577 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 TMIGD1Q6UXZ0 262 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 PARGQ86W56 976 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 PHACTR4Q8IZ21 702 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 APIPQ96GX9 242 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 SLC6A18Q96N87 628 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 CDRT15Q96T59 188 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 AASDHPPTQ9NRN7 309 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 SIRT5Q9NXA8 310 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 OR6C2Q9NZP2 312 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 PCDHGA7Q9Y5G6 932 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 ZDBF2Q9HCK1 2354 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 MUC6Q6W4X9 2439 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 AXIN1O15169 862 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 PRMT3O60678 531 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 MYO1DO94832 1006 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 CCNDBP1O95273 360 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 CLDN8P56748 225 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 RAB15P59190 212 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 ABATP80404 500 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 REEP5Q00765 189 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 PRDX1Q06830 199 aaKnown RBP16.23■□□□□ 0.19
COPS3-212ENST00000539941 PTGR1Q14914 329 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 PIGGQ5H8A4 983 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 NOXRED1Q6NXP6 359 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 ZNF554Q86TJ5 538 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 MINDY1Q8N5J2 469 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 C2orf73Q8N5S3 287 aaPredicted RBP16.23■□□□□ 0.19
COPS3-212ENST00000539941 DPP10Q8N608 796 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 OR4K1Q8NGD4 311 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 CCL4L1Q8NHW4 92 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 CXorf40BQ96DE9 158 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 FAM122AQ96E09 287 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 C11orf24Q96F05 449 aaPredicted RBP16.23■□□□□ 0.19
COPS3-212ENST00000539941 APOLD1Q96LR9 279 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 ACAT2Q9BWD1 397 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 RHBGQ9H310 441 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 CLMPQ9H6B4 373 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 SPAG4Q9NPE6 437 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 DMRT3Q9NQL9 472 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 MAP10Q9P2G4 905 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 ZNF624Q9P2J8 865 aaPredicted RBP16.23■□□□□ 0.19
COPS3-212ENST00000539941 MAPRE3Q9UPY8 281 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 DLGAP4Q9Y2H0 992 aa16.23■□□□□ 0.19
COPS3-212ENST00000539941 OR5K4A6NMS3 321 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 C9JVG2 144 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 PRICKLE3O43900 615 aaPredicted RBP16.22■□□□□ 0.19
COPS3-212ENST00000539941 E2F6O75461 281 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 EML2O95834 649 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 IL6P05231 212 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 PXNP49023 591 aaPredicted RBP16.22■□□□□ 0.19
COPS3-212ENST00000539941 ACTR3P61158 418 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 RPS13P62277 151 aaKnown RBP16.22■□□□□ 0.19
COPS3-212ENST00000539941 RACK1P63244 317 aaKnown RBP16.22■□□□□ 0.19
COPS3-212ENST00000539941 TLR1Q15399 786 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 SPATS1Q496A3 300 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 C1orf146Q5VVC0 180 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 PRR23BQ6ZRT6 265 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 SMYD1Q8NB12 490 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 WDR60Q8WVS4 1066 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 GPATCH1Q9BRR8 931 aaKnown RBP16.22■□□□□ 0.19
COPS3-212ENST00000539941 KCNH6Q9H252 994 aa16.22■□□□□ 0.19
COPS3-212ENST00000539941 K7ESF4 209 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 PDE5AO76074 875 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 SDC1P18827 310 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 HRH2P25021 359 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 CD38P28907 300 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 SLC19A1P41440 591 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 C21orf58P58505 322 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 RPL6Q02878 288 aaKnown RBP16.21■□□□□ 0.19
COPS3-212ENST00000539941 TIGD2Q4W5G0 525 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 GALNT18Q6P9A2 607 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 IYDQ6PHW0 289 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 RIPOR1Q6ZS17 1223 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 SPATA24Q86W54 205 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms