RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RAB39AQ14964 217 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 SF1Q15637 639 aaKnown RBP17.27■□□□□ 0.36
GNE-204ENST00000539208 FAM78AQ5JUQ0 283 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 CBLL1Q75N03 491 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 EIF3MQ7L2H7 374 aaKnown RBP17.27■□□□□ 0.36
GNE-204ENST00000539208 TMPRSS11BQ86T26 416 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 ZNF547Q8IVP9 402 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 ZNF784Q8NCA9 323 aaPredicted RBP17.27■□□□□ 0.36
GNE-204ENST00000539208 OR2L2Q8NH16 312 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.27■□□□□ 0.36
GNE-204ENST00000539208 DTNBP1Q96EV8 351 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 CHST8Q9H2A9 424 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 ATP6V1HQ9UI12 483 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 PCDHGA8Q9Y5G5 932 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 ORC6Q9Y5N6 252 aa17.27■□□□□ 0.36
GNE-204ENST00000539208 PRRC2BQ5JSZ5 2229 aaKnown RBP17.27■□□□□ 0.36
GNE-204ENST00000539208 RNASET2O00584 256 aaKnown RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 HS6ST1O60243 411 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 LZTS3O60299 673 aaPredicted RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 MMP20O60882 483 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 C1QCP02747 245 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 ACADLP28330 430 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 PIGAP37287 484 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 YAP1P46937 504 aaKnown RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 TAP2Q03519 686 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 LRRC23Q53EV4 343 aaPredicted RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 BROXQ5VW32 411 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 OR2T5Q6IEZ7 315 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 NPAS3Q8IXF0 933 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 OR2T29Q8NH02 315 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 CDC26Q8NHZ8 85 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 SETD7Q8WTS6 366 aaKnown RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 ASB16Q96NS5 453 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 TSC22D4Q9Y3Q8 395 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 LOC100130705A0A1B0GUX0 176 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 OTOL1A6NHN0 477 aaPredicted RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 PCDH7O60245 1069 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 POP7O75817 140 aaKnown RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 ITGAMP11215 1152 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 GABARAPL2P60520 117 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 GRSF1Q12849 480 aaKnown RBP eCLIP17.26■□□□□ 0.35
GNE-204ENST00000539208 TOP3AQ13472 1001 aaPredicted RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 ZNF234Q14588 700 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 SKIV2LQ15477 1246 aaKnown RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 HIST2H2ACQ16777 129 aaPredicted RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 HKDC1Q2TB90 917 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 C11orf91Q3C1V1 193 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 CATSPEREQ5SY80 951 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 C6orf141Q5SZD1 244 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 HIST2H2AA3Q6FI13 130 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 ANKRD26P1Q6NSI1 321 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 UNC5DQ6UXZ4 953 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 TMEM26Q6ZUK4 368 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 ERN2Q76MJ5 926 aaKnown RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 PIWIL3Q7Z3Z3 882 aaKnown RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 CHDHQ8NE62 594 aaPredicted RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 GOT1L1Q8NHS2 421 aaPredicted RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 NRBF2Q96F24 287 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 BHLHE41Q9C0J9 482 aaPredicted RBP17.26■□□□□ 0.35
GNE-204ENST00000539208 CDH7Q9ULB5 785 aa17.26■□□□□ 0.35
GNE-204ENST00000539208 GNG14A0A1W2PPG7 69 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 HEPACAM2A8MVW5 462 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 DPM1O60762 260 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ABCB7O75027 752 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ZNF8P17098 575 aaPredicted RBP17.25■□□□□ 0.35
GNE-204ENST00000539208 PRKACGP22612 351 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 RYKP34925 604 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 RPS6KA3P51812 740 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 NUP107P57740 925 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 CTBSQ01459 385 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 SLBPQ14493 270 aaKnown RBP eCLIP17.25■□□□□ 0.35
GNE-204ENST00000539208 ANKRD34AQ69YU3 496 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 OR10Q1Q8NGQ4 319 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ZFP90Q8TF47 636 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 SMARCD2Q92925 531 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 C12orf43Q96C57 262 aaKnown RBP17.25■□□□□ 0.35
GNE-204ENST00000539208 ZFYVE19Q96K21 471 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 DYRK4Q9NR20 520 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 VNN3Q9NY84 501 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 EBF1Q9UH73 591 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 FZD4Q9ULV1 537 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 EXO1Q9UQ84 846 aaKnown RBP17.25■□□□□ 0.35
GNE-204ENST00000539208 MKI67P46013 3256 aaKnown RBP17.25■□□□□ 0.35
GNE-204ENST00000539208 DENND4AQ7Z401 1863 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 PDE4DIPQ5VU43 2346 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 TRIM64BA6NI03 449 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 FABP3P05413 133 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ARHGDIAP52565 204 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ISL1P61371 349 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ZNF763Q0D2J5 394 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 PPP1R8Q12972 351 aaKnown RBP17.25■□□□□ 0.35
GNE-204ENST00000539208 TUBA3CQ13748 450 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ZNF691Q5VV52 312 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 DHRS4L2Q6PKH6 230 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 NXPE4Q6UWF7 544 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 TRMT11Q7Z4G4 463 aaKnown RBP17.25■□□□□ 0.35
GNE-204ENST00000539208 RBM23Q86U06 439 aaKnown RBP17.25■□□□□ 0.35
GNE-204ENST00000539208 GPR156Q8NFN8 814 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 FBLIM1Q8WUP2 373 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 SLC5A11Q8WWX8 675 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms