RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TRAPPC9Q96Q05 1148 aa15□□□□□ -0.01
SFSWAP-206ENST00000537582 SEMA6CQ9H3T2 930 aa15□□□□□ -0.01
SFSWAP-206ENST00000537582 SNX7Q9UNH6 387 aa15□□□□□ -0.01
SFSWAP-206ENST00000537582 PCDHGA11Q9Y5H2 935 aa15□□□□□ -0.01
SFSWAP-206ENST00000537582 ZFHX2Q9C0A1 2572 aaPredicted RBP15□□□□□ -0.01
SFSWAP-206ENST00000537582 ASCC3Q8N3C0 2202 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 TRBC2A0A5B9 178 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 A8MU76 341 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 AGRPO00253 132 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 CBFA2T3O75081 653 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 CKMT2P17540 419 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 SCTRP47872 440 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 HK2P52789 917 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 RPS13P62277 151 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 SNRPNP63162 240 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 SLC14A1Q13336 389 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 LAPTM5Q13571 262 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 HIST2H2ACQ16777 129 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 DEFB110Q30KQ9 67 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 INAVAQ3KP66 663 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 LSM12Q3MHD2 195 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 GKAP1Q5VSY0 366 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 HIST2H2AA3Q6FI13 130 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 FRMPD2BQ6IN97 320 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 KRT78Q8N1N4 520 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 OR6C4Q8NGE1 309 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 MAELQ96JY0 434 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 MARK4Q96L34 752 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 LRRN3Q9H3W5 708 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 AKTIPQ9H8T0 292 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 PRM3Q9NNZ6 103 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 DMRT3Q9NQL9 472 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 EPHA6Q9UF33 1036 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 PILRAQ9UKJ1 303 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 G3BP2Q9UN86 482 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 HCN4Q9Y3Q4 1203 aa14.99□□□□□ -0.01
SFSWAP-206ENST00000537582 LOC105369274A0A096LPK9 316 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 LOC102723532A0A0G2JNH3 316 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 A0A0J9YVX5 310 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 TRPC5OSA6NMA1 111 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 PROB1E7EW31 1015 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 E9PBE3 544 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 SAP18O00422 153 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 KLHL41O60662 606 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 PEX11AO75192 247 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 RASSF9O75901 435 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 TGFB1P01137 390 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 NHLH1Q02575 133 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 CCDC157Q569K6 752 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 STPG1Q5TH74 334 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 NXNQ6DKJ4 435 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 TRIM46Q7Z4K8 759 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 OR4N4Q8N0Y3 316 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 C19orf47Q8N9M1 422 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 TUBGCP3Q96CW5 907 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 ZDHHC12Q96GR4 267 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 MAGEB10Q96LZ2 347 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 RILPQ96NA2 401 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 AICDAQ9GZX7 198 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 RAB33BQ9H082 229 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 OR51B5Q9H339 312 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 PCDHGA4Q9Y5G9 962 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 KLK4Q9Y5K2 254 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 MN1Q10571 1320 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 HEATR5BQ9P2D3 2071 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 TLCD2A6NGC4 264 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 C9P02748 559 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 SERPIND1P05546 499 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 SEPHS1P49903 392 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 DUSP3P51452 185 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 KCNAB1Q14722 419 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 NR6A1Q15406 480 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 GALNTL6Q49A17 601 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 CACHD1Q5VU97 1274 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 RIPOR1Q6ZS17 1223 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 LARP4Q71RC2 724 aaKnown RBP eCLIP14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 VN1R4Q7Z5H5 301 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 KIRREL3Q8IZU9 778 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 CREB3L4Q8TEY5 395 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 CCT6BQ92526 530 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 SLC45A3Q96JT2 553 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 SIKE1Q9BRV8 207 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 RHBGQ9H310 441 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 EPB41L1Q9H4G0 881 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 TCF7L2Q9NQB0 619 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 C1GALT1Q9NS00 363 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 SLC12A4Q9UP95 1085 aa14.98□□□□□ -0.01
SFSWAP-206ENST00000537582 COL5A1P20908 1838 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 LSM1O15116 133 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 P2RX6O15547 441 aa14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 EZRP15311 586 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 ACP1P24666 158 aa14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 HRH2P25021 359 aa14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 CXCR2P25025 360 aa14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 ACADVLP49748 655 aa14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 WDR74Q6RFH5 385 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 RNF44Q7L0R7 432 aa14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 PLXDC1Q8IUK5 500 aa14.97□□□□□ -0.01
SFSWAP-206ENST00000537582 MFSD9Q8NBP5 474 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms