RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 PRDX1Q06830 199 aaKnown RBP7.58□□□□□ -1.2
CHFR-211ENST00000535897 MYBPHQ13203 477 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 PTK6Q13882 451 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 FAM53BQ14153 422 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 SFT2D3Q587I9 215 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.58□□□□□ -1.2
CHFR-211ENST00000535897 SLC25A25Q6KCM7 469 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 PAPD4Q6PIY7 484 aaKnown RBP7.58□□□□□ -1.2
CHFR-211ENST00000535897 CEP128Q6ZU80 1094 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 PEX26Q7Z412 305 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 ANKRD37Q7Z713 158 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 SDCCAG8Q86SQ7 713 aaPredicted RBP7.58□□□□□ -1.2
CHFR-211ENST00000535897 CCDC170Q8IYT3 715 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 MPP5Q8N3R9 675 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 CPSF7Q8N684 471 aaKnown RBP7.58□□□□□ -1.2
CHFR-211ENST00000535897 SLC35B2Q8TB61 432 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 ZCCHC10Q8TBK6 192 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 M1APQ8TC57 530 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 ATG4AQ8WYN0 398 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 PEX13Q92968 403 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 CALR3Q96L12 384 aaKnown RBP7.58□□□□□ -1.2
CHFR-211ENST00000535897 LPAR4Q99677 370 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 EBNA1BP2Q99848 306 aaKnown RBP7.58□□□□□ -1.2
CHFR-211ENST00000535897 ZNF559Q9BR84 538 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 RBCK1Q9BYM8 510 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 RAB6BQ9NRW1 208 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 PACSIN2Q9UNF0 486 aaPredicted RBP7.58□□□□□ -1.2
CHFR-211ENST00000535897 ZNF148Q9UQR1 794 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 DUSP10Q9Y6W6 482 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 GTF3C1Q12789 2109 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 HEATR5BQ9P2D3 2071 aa7.58□□□□□ -1.2
CHFR-211ENST00000535897 ABCA2Q9BZC7 2435 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 TCRBV7S2A1N4TA0A589 114 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 NKX2-6A6NCS4 301 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 FOXO6A8MYZ6 492 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 H3BMM5 538 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 H7BY64 318 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 MYO1CO00159 1063 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 PFDN6O15212 129 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 ZWINTO95229 277 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 MATN4O95460 622 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 NSA2O95478 260 aaKnown RBP7.57□□□□□ -1.2
CHFR-211ENST00000535897 SLC16A8O95907 504 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 CYC1P08574 325 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 CD99P14209 185 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 IL1RNP18510 177 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 RPS3P23396 243 aaKnown RBP eCLIP7.57□□□□□ -1.2
CHFR-211ENST00000535897 ATP5DP30049 168 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 PTGS2P35354 604 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 HSD17B2P37059 387 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 PPP2R2AP63151 447 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 CRADDP78560 199 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 ABATP80404 500 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 ARHGAP19Q14CB8 494 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 ABRAXAS2Q15018 415 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 NSDHLQ15738 373 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 KLHL38Q2WGJ6 581 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 PCID2Q5JVF3 399 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 CTSL3PQ5NE16 218 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 RNF187Q5TA31 235 aaPredicted RBP7.57□□□□□ -1.2
CHFR-211ENST00000535897 ZNF425Q6IV72 752 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 MRNIPQ6NTE8 343 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 H3F3CQ6NXT2 135 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 PRSS41Q7RTY9 318 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 CD163Q86VB7 1156 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 SIAH3Q8IW03 269 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 CCDC89Q8N998 374 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 RNF214Q8ND24 703 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 TMEM125Q96AQ2 219 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 PRAP1Q96NZ9 151 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 DMRTA2Q96SC8 542 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 PKP4Q99569 1192 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 NPAS2Q99743 824 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 MACROD1Q9BQ69 325 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 CDCP1Q9H5V8 836 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 ANKHQ9HCJ1 492 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 MMP25Q9NPA2 562 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 AMFRQ9UKV5 643 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 CRYL1Q9Y2S2 319 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 ASB1Q9Y576 335 aa7.57□□□□□ -1.2
CHFR-211ENST00000535897 FLNAP21333 2647 aaKnown RBP7.57□□□□□ -1.2
CHFR-211ENST00000535897 INTS1Q8N201 2190 aaKnown RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 SCN3AQ9NY46 2000 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ACANP16112 2415 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 A0A1B0GTH9 108 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 GRID2IPA4D2P6 1211 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ZNF860A6NHJ4 632 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 USP27XA6NNY8 438 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 GOLGA8KD6RF30 607 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 GOLGA8TH3BQL2 631 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ADAM10O14672 748 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 NME2P1O60361 137 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 PRMT3O60678 531 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 RDH16O75452 317 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 PSIP1O75475 530 aaKnown RBP7.56□□□□□ -1.2
CHFR-211ENST00000535897 NEURL1O76050 574 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 VAPBO95292 243 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ESR1P03372 595 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 ERGP11308 486 aa7.56□□□□□ -1.2
CHFR-211ENST00000535897 NME2P22392 152 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms