RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NMT2O60551 498 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 DKC1O60832 514 aaKnown RBP eCLIP3.13□□□□□ -1.912e-36■■□□□ 12.6
SNHG1-202ENST00000535689 KDM4BO94953 1096 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 BMP10O95393 424 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 APOA4P06727 396 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 LINGO3P0C6S8 592 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 MYBL1P10243 752 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 MMP9P14780 707 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PFKFB1P16118 471 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PRLRP16471 622 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ERCC2P18074 760 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 MARK3P27448 753 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SSTR2P30874 369 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SLC6A6P31641 620 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ACSL1P33121 698 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 KIF5BP33176 963 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PCGF2P35227 344 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 NR2C2P49116 596 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 FMO5P49326 533 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 RAB28P51157 221 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 CSE1LP55060 971 aaKnown RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 CLDN20P56880 219 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 NLRP11P59045 1033 aaKnown RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 CDK3Q00526 305 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SP4Q02446 784 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ELAVL2Q12926 359 aaKnown RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 TRDNQ13061 729 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 TOMM20Q15388 145 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 LPAL2Q16609 132 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 DUOXA1Q1HG43 343 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 CBWD6Q4V339 395 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 KRTCAP3Q53RY4 240 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 IGSF11Q5DX21 431 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 BMP2KLQ5H9B9 411 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 CBWD3Q5JTY5 395 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PPM1LQ5SGD2 360 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 GCNT6Q5T4J0 391 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 CST9LP1Q5W188 147 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 NSUN5P2Q63ZY6 315 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 TWF2Q6IBS0 349 aaKnown RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 GDPD4Q6W3E5 623 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 GET4Q7L5D6 327 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 RABEPKQ7Z6M1 372 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 LDB1Q86U70 411 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 KBTBD6Q86V97 674 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ELMOD1Q8N336 334 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 HDDC3Q8N4P3 179 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 METTL13Q8N6R0 699 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 RBMXL3Q8N7X1 1067 aaKnown RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 LSMEM1Q8N8F7 131 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 OR10S1Q8NGN2 331 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 LILRB1Q8NHL6 650 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PTPMT1Q8WUK0 201 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 DEPDC1BQ8WUY9 529 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 CCDC107Q8WV48 283 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SMPDL3BQ92485 455 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 LPGAT1Q92604 370 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ABTB1Q969K4 478 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 HDAC11Q96DB2 347 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 TMCO6Q96DC7 493 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SPACA9Q96E40 222 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 GRAMD2BQ96HH9 432 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SPATA17Q96L03 361 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 IL17FQ96PD4 163 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 MS4A10Q96PG2 267 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 GCNAQ96QF7 691 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SPAG5Q96R06 1193 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 LZTS2Q9BRK4 669 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 UBAC1Q9BSL1 405 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 NUSAP1Q9BXS6 441 aaKnown RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 TXLNGYQ9BZA5 131 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 WNT5BQ9H1J7 359 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SLCO5A1Q9H2Y9 848 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PDE7BQ9NP56 450 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ANKEF1Q9NU02 776 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ABCF3Q9NUQ8 709 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 C1RLQ9NZP8 487 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PLAGL1Q9UM63 463 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 DDX19BQ9UMR2 479 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 FAM169AQ9Y6X4 670 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 CKAP5Q14008 2032 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ASCC3Q8N3C0 2202 aaKnown RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 TTC41PQ6P2S7 1318 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 BPTFQ12830 3046 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZCWPW2A0A1B0GU75 182 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 C4orf47A7E2U8 309 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 E9PAM4 449 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 J3QKU1 62 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF263O14978 683 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 TEX28O15482 410 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 TRAPPC3O43617 180 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 AHCYL1O43865 530 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 SLC28A2O43868 658 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 N4BP1O75113 896 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF217O75362 1048 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ERAL1O75616 437 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 CCDC175P0C221 793 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 GOLGA8HP0CJ92 632 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 SELLP14151 372 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 HOXB6P17509 224 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms