RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TAOK1Q7L7X3 1001 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 METTL27Q8N6F8 245 aaPredicted RBP19.47■□□□□ 0.71
CCS-208ENST00000533244 APOBEC4Q8WW27 367 aaKnown RBP19.47■□□□□ 0.71
CCS-208ENST00000533244 TSNARE1Q96NA8 513 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 GPR78Q96P69 363 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 SPNS1Q9H2V7 528 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 ANKZF1Q9H8Y5 726 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 NUDT4Q9NZJ9 180 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 IKBKGQ9Y6K9 419 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 EXOC1LA0A1B0GW35 172 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 POC1B-GALNT4F8VUJ3 575 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 FOXS1O43638 330 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 KRT38O76015 456 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 WDR47O94967 919 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 KLHL2O95198 593 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 FAM87AP0C7U9 286 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 FAM53BQ14153 422 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 LY6DQ14210 128 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 NKG7Q16617 165 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 FAM83EQ2M2I3 478 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 NXPE4Q6UWF7 544 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 ZNF740Q8NDX6 193 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.46■□□□□ 0.71
CCS-208ENST00000533244 SPSB2Q99619 263 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 ARHGAP9Q9BRR9 750 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 SEMA4CQ9C0C4 833 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 CNOT10Q9H9A5 744 aaKnown RBP19.46■□□□□ 0.71
CCS-208ENST00000533244 ZNF304Q9HCX3 659 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 WWOXQ9NZC7 414 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 GPRC5BQ9NZH0 403 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 CD274Q9NZQ7 290 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 FETUBQ9UGM5 382 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 PTRH2Q9Y3E5 179 aaKnown RBP19.46■□□□□ 0.71
CCS-208ENST00000533244 TLN1Q9Y490 2541 aaKnown RBP19.46■□□□□ 0.71
CCS-208ENST00000533244 CFAP46Q8IYW2 2715 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 CCDC88CQ9P219 2028 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 PCSK5Q92824 1860 aa19.46■□□□□ 0.71
CCS-208ENST00000533244 IGLV3-12A0A075B6K2 115 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 VSTM2BA6NLU5 285 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 UMODP07911 640 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 MTHFD2P13995 350 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 GNAZP19086 355 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 FOLR3P41439 243 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 SCTRP47872 440 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 POLE2P56282 527 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 MEF2AQ02078 507 aaPredicted RBP19.45■□□□□ 0.7
CCS-208ENST00000533244 CDC16Q13042 620 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 ACAP2Q15057 778 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 TMEM214Q6NUQ4 689 aaKnown RBP19.45■□□□□ 0.7
CCS-208ENST00000533244 SLCO4C1Q6ZQN7 724 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 TMPRSS11BQ86T26 416 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 ASPGQ86U10 573 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 APLFQ8IW19 511 aaPredicted RBP19.45■□□□□ 0.7
CCS-208ENST00000533244 TMEM151BQ8IW70 566 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 CAMKVQ8NCB2 501 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 UBTD2Q8WUN7 234 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 DRC3Q9H069 523 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 ADNPQ9H2P0 1102 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 GEMIN8Q9NWZ8 242 aaKnown RBP19.45■□□□□ 0.7
CCS-208ENST00000533244 CTSFQ9UBX1 484 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 TUBD1Q9UJT1 453 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 CDC14AQ9UNH5 594 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 MAN2B2Q9Y2E5 1009 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 MRPS2Q9Y399 296 aaKnown RBP19.45■□□□□ 0.7
CCS-208ENST00000533244 MAU2Q9Y6X3 613 aa19.45■□□□□ 0.7
CCS-208ENST00000533244 STK16O75716 305 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 STATHP02808 62 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 HSPA7P48741 367 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 FOXL2P58012 376 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 DSG2Q14126 1118 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 SLC29A2Q14542 456 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 SSPNQ14714 243 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 NDUFA9Q16795 377 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 ADGRD1Q6QNK2 874 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 PLD6Q8N2A8 252 aaKnown RBP19.44■□□□□ 0.7
CCS-208ENST00000533244 AMER3Q8N944 861 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 CAPS2Q9BXY5 557 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 DNAJC11Q9NVH1 559 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 COPG2Q9UBF2 871 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 NXT1Q9UKK6 140 aaKnown RBP19.44■□□□□ 0.7
CCS-208ENST00000533244 ASB1Q9Y576 335 aa19.44■□□□□ 0.7
CCS-208ENST00000533244 TRIM49D1C9J1S8 452 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 UBXN8O00124 270 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 PRPF4O43172 522 aaKnown RBP eCLIP19.43■□□□□ 0.77e-7■■■■□ 22.1
CCS-208ENST00000533244 OR1F1O43749 312 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 S100BP04271 92 aaPredicted RBP19.43■□□□□ 0.7
CCS-208ENST00000533244 SNRPAP09012 282 aaKnown RBP19.43■□□□□ 0.7
CCS-208ENST00000533244 AHRP35869 848 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 FBXO48Q5FWF7 155 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 ATG9BQ674R7 924 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 LRRC70Q7Z2Q7 622 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 RAB43Q86YS6 212 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 TBC1D19Q8N5T2 526 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 ANKRD53Q8N9V6 530 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 SLC13A3Q8WWT9 602 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 EXT2Q93063 718 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 ESAMQ96AP7 390 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 MACROD1Q9BQ69 325 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 AIF1LQ9BQI0 150 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 CD244Q9BZW8 370 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms