RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ATAD5Q96QE3 1844 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 A0A1W2PQ09 198 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ERI2A8K979 691 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 PMM2O15305 246 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 KIAA0513O60268 411 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 DLX3O60479 287 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 KLHL18O94889 574 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MAOBP27338 520 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 LCN1P31025 176 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 STAT5AP42229 794 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF143P52747 638 aaPredicted RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC6A3Q01959 620 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SEMG2Q02383 582 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 DSG2Q14126 1118 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 TEAD2Q15562 447 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 GPR19Q15760 415 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 RAB30Q15771 203 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 TATDN3Q17R31 274 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF425Q6IV72 752 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 LYPD8Q6UX82 237 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 DET1Q7L5Y6 550 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MAVSQ7Z434 540 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 UNC93AQ86WB7 457 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MFSD4AQ8N468 514 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MEIOBQ8N635 442 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 IL17RDQ8NFM7 739 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 OR5T2Q8NGG2 359 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 COQ8AQ8NI60 647 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF461Q8TAF7 563 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 COQ10AQ96MF6 247 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ACBD6Q9BR61 282 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SP110Q9HB58 689 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ABCB8Q9NUT2 735 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 DTLQ9NZJ0 730 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 RPS6KA6Q9UK32 745 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MGAT4BQ9UQ53 548 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 COQ4Q9Y3A0 265 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 PSAT1Q9Y617 370 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 A3GALT2U3KPV4 340 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 KNTC1P50748 2209 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CACNA1HO95180 2353 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 METTL21EPA6NDL7 271 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 OR6C75A6NL08 312 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 NEDD8-MDP1E9PL57 170 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CAPN5O15484 640 aaPredicted RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 UGT2B17O75795 530 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 C1QBP02746 253 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 PFKMP08237 780 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 OXTRP30559 389 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 GRIA1P42261 906 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNC1P48547 511 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MAPKAPK2P49137 400 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 UGT2B15P54855 530 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CDK5R2Q13319 367 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 LAPTM5Q13571 262 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 TSTQ16762 297 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 TCEAL5Q5H9L2 206 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CATSPEREQ5SY80 951 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 BEND5Q7L4P6 421 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 PRSS48Q7RTY5 328 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 METTL3Q86U44 580 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 FBXO39Q8N4B4 442 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MINDY1Q8N5J2 469 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 BEND7Q8N7W2 519 aaPredicted RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 PCNPQ8WW12 178 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 GIMAP1Q8WWP7 306 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SGCDQ92629 289 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 TCEAL4Q96EI5 215 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 TPD52L3Q96J77 140 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 RPL10LQ96L21 214 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MYOCQ99972 504 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 USB1Q9BQ65 265 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 C1QTNF7Q9BXJ2 289 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 TNKS2Q9H2K2 1166 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 FBXO44Q9H4M3 255 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CASS4Q9NQ75 786 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 WNT6Q9Y6F9 365 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ATG2BQ96BY7 2078 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MN1Q10571 1320 aaPredicted RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ZSWIM8A7E2V4 1837 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 C2orf78A6NCI8 922 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 METTL15A6NJ78 407 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF98A6NK75 572 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CLDN24A6NM45 220 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC9A3R1O14745 358 aaPredicted RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 GRID2O43424 1007 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ANXA9O76027 345 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CLEC2LP0C7M8 214 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SRCP12931 536 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC2A4P14672 509 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SPNP16150 400 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 HERVK_113P63132 956 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 DUSP6Q16828 381 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 PFKFB4Q16877 469 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 HSF5Q4G112 596 aaPredicted RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 YIF1BQ5BJH7 314 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SGO1Q5FBB7 561 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CASP12Q6UXS9 341 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 LINGO4Q6UY18 593 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF782Q6ZMW2 699 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms