RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 ARGFXA6NJG6 315 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 IFRD1O00458 451 aaPredicted RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 BTN3A1O00481 513 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 NIPSNAP2O75323 286 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 RASSF9O75901 435 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 USP1O94782 785 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLCO2B1O94956 709 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 SEC31AO94979 1220 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ERVK-10P10266 1014 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 FOLR1P15328 257 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 CHRM3P20309 590 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 GABRB3P28472 473 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 PRDX3P30048 256 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 PPARGP37231 505 aaPredicted RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 RPL21P46778 160 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 KPNA2P52292 529 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 PGGT1BP53609 377 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 EIF3BP55884 814 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ERVFRD-1P60508 538 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 C2orf54Q08AI8 447 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 DNASE1L3Q13609 305 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 IL10RAQ13651 578 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 GRB7Q14451 532 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 TYSND1Q2T9J0 566 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 CCSMST1Q4G0I0 132 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 HSP90AA5PQ58FG0 334 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 HLA-DQA1Q5Y7H0 255 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 KIAA0930Q6ICG6 404 aaPredicted RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 MRNIPQ6NTE8 343 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 FAM199XQ6PEV8 388 aaPredicted RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 CNSTQ6PJW8 725 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 MTERF4Q7Z6M4 381 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 SDCCAG8Q86SQ7 713 aaPredicted RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ADGRF3Q8IZF5 1079 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 C2orf73Q8N5S3 287 aaPredicted RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 OTUD6BQ8N6M0 293 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ACVR1CQ8NER5 493 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 NUP43Q8NFH3 380 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ASZ1Q8WWH4 475 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 LCN9Q8WX39 176 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 STAMBPL1Q96FJ0 436 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ZDHHC12Q96GR4 267 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 OR6C1Q96RD1 312 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 EBNA1BP2Q99848 306 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ZPBPQ9BS86 351 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 HGH1Q9BTY7 390 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLC25A23Q9BV35 468 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 UNKQ9C0B0 810 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 RAB33BQ9H082 229 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 SRMSQ9H3Y6 488 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 EPB41L1Q9H4G0 881 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ACTL8Q9H568 366 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 TFB2MQ9H5Q4 396 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 VPS37BQ9H9H4 285 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 L2HGDHQ9H9P8 463 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 FBXO6Q9NRD1 293 aaPredicted RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 IARS2Q9NSE4 1012 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 C20orf96Q9NUD7 363 aaPredicted RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 SPHK1Q9NYA1 384 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 SAMD15Q9P1V8 674 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 RNF14Q9UBS8 474 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ICKQ9UPZ9 632 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 RUVBL2Q9Y230 463 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 ASF1AQ9Y294 204 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 TDRKHQ9Y2W6 561 aaKnown RBP6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 MED16Q9Y2X0 877 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 NFS1Q9Y697 457 aa6.73□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLC9B1P1A6NJY1 282 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 A6NL46 340 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 EFCAB8A8MWE9 144 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 NPIPB6E9PJ23 425 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 CCDC188H7C350 402 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 QSOX1O00391 747 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 CTIFO43310 598 aaKnown RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 RAD51CO43502 376 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 HCRTR1O43613 425 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 PPM1BO75688 479 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 PIAS1O75925 651 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 URI1O94763 535 aaPredicted RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 AHSGP02765 367 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 ANKRD34CP0C6C1 535 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 PVRP15151 417 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 NELFEP18615 380 aaKnown RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 RPS3P23396 243 aaKnown RBP eCLIP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 CFPP27918 469 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 ELK3P41970 407 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLC1A2P43004 574 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 MPP1Q00013 466 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 TIAL1Q01085 375 aaKnown RBP eCLIP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 RAPSNQ13702 412 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 THOC5Q13769 683 aaKnown RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 FASTKD3Q14CZ7 662 aaKnown RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 LONRF1Q17RB8 773 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SYTL3Q4VX76 610 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 ACSBG2Q5FVE4 666 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 AARS2Q5JTZ9 985 aaKnown RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 PRAMEF17Q5VTA0 474 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 ZNF470Q6ECI4 717 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 JMJD6Q6NYC1 403 aaPredicted RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 ZNF449Q6P9G9 518 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms