RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 FAM53CQ9NYF3 392 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 LNPEPQ9UIQ6 1025 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 TIMM22Q9Y584 194 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 KLK4Q9Y5K2 254 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 CHD8Q9HCK8 2581 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 CELSR3Q9NYQ7 3312 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 AKAP13Q12802 2813 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 SERTM1A2A2V5 107 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 SYCE1LA8MT33 242 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 C9orf172C9J069 976 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 H0YGG7 62 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 SMIM24O75264 130 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 SUPT7LO94864 414 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 KLHL18O94889 574 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 JUNP05412 331 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 C1GALT1C1LP0DN25 315 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ITGAXP20702 1163 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 CMPK1P30085 196 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 CCKBRP32239 447 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ID4P47928 161 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 HNMTP50135 292 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 VSX2P58304 361 aaPredicted RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 DNAJB13P59910 316 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ARF3P61204 181 aaPredicted RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 E2F1Q01094 437 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 CLCQ05315 142 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 HYAL2Q12891 473 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 PRKAA1Q13131 559 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 SRSF6Q13247 344 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 E2F2Q14209 437 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 PUM1Q14671 1186 aaKnown RBP eCLIP6.2□□□□□ -1.42
CD44-214ENST00000525211 CHI3L2Q15782 390 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 PDK4Q16654 411 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 HKDC1Q2TB90 917 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 CCDC153Q494R4 210 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ARL13AQ5H913 290 aaPredicted RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 C3orf38Q5JPI3 329 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 LIPMQ5VYY2 423 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ARMC6Q6NXE6 501 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 FOXR1Q6PIV2 292 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 FRMD7Q6ZUT3 714 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 RNF44Q7L0R7 432 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 LRRC70Q7Z2Q7 622 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 UBE3DQ7Z6J8 389 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 C17orf64Q86WR6 236 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 MCATQ8IVS2 390 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.2□□□□□ -1.42
CD44-214ENST00000525211 LINC00528Q8N1L1 170 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 CREB3L4Q8TEY5 395 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 AGAP11Q8TF27 550 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 ATL1Q8WXF7 558 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 GRAMD1AQ96CP6 724 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ZNF501Q96CX3 271 aaPredicted RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 MTFMTQ96DP5 389 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 WDR34Q96EX3 536 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ZDHHC12Q96GR4 267 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 SLC45A3Q96JT2 553 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 C10orf90Q96M02 699 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 OR6C1Q96RD1 312 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 PAIP2Q9BPZ3 127 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 SORBS1Q9BX66 1292 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 RAB11FIP5Q9BXF6 653 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 TUBB1Q9H4B7 451 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 IPPKQ9H8X2 491 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 CNOT10Q9H9A5 744 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 SLCO1B3Q9NPD5 702 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 FOXJ2Q9P0K8 574 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 SENP1Q9P0U3 644 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 OPTCQ9UBM4 332 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 GIMAP2Q9UG22 337 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 PISDQ9UG56 409 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 ZDHHC2Q9UIJ5 367 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 SATB2Q9UPW6 733 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 CLCA2Q9UQC9 943 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 APOBEC2Q9Y235 224 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 BTRCQ9Y297 605 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 LOXL2Q9Y4K0 774 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 TMEM184BQ9Y519 407 aaPredicted RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 B3GALT1Q9Y5Z6 326 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 MDC1Q14676 2089 aaKnown RBP6.2□□□□□ -1.42
CD44-214ENST00000525211 NCOR2Q9Y618 2525 aa6.2□□□□□ -1.42
CD44-214ENST00000525211 FER1L5A0AVI2 2057 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 A0A0G2JN53 185 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 HMGB1P1B2RPK0 211 aaPredicted RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 TMEM150CB9EJG8 249 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 ATP8B1O43520 1251 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 OR1F1O43749 312 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 TRIM13O60858 407 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 ZBTB11O95625 1053 aaPredicted RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 S100BP04271 92 aaPredicted RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 ANKRD34CP0C6C1 535 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 JUPP14923 745 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 TAC1P20366 129 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 NR1D1P20393 614 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 HNRNPH1P31943 449 aaKnown RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 GPC1P35052 558 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 HSD17B2P37059 387 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 CASP2P42575 452 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 RNF144AP50876 292 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms