RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TAS2R14Q9NYV8 317 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 IL1RAPL1Q9NZN1 696 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ADAM22Q9P0K1 906 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 EPS15L1Q9UBC2 864 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 ARHGAP26Q9UNA1 814 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 NAALADL1Q9UQQ1 740 aa3.16□□□□□ -1.9
VPS13B-209ENST00000521559 HBS1LQ9Y450 684 aaKnown RBP3.16□□□□□ -1.9
VPS13B-209ENST00000521559 CENPFP49454 3210 aa3.15□□□□□ -1.9
VPS13B-209ENST00000521559 PDE4DIPQ5VU43 2346 aa3.15□□□□□ -1.9
VPS13B-209ENST00000521559 BRCA2P51587 3418 aa3.15□□□□□ -1.9
VPS13B-209ENST00000521559 PTPRSQ13332 1948 aa3.15□□□□□ -1.9
VPS13B-209ENST00000521559 hDV102S1A0JD36 115 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 FAM170AA1A519 330 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 HEPACAM2A8MVW5 462 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 EIF3CLB5ME19 914 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 LOC730098B7Z3J9 87 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 GOLGA8SH3BPF8 625 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 BMPR1BO00238 502 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 SLC9A3R1O14745 358 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CAPN9O14815 690 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF263O14978 683 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 GRID2O43424 1007 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 DAB1O75553 588 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 GRAP2O75791 330 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 LCA5LO95447 670 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 TRUB2O95900 331 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 TBX18O95935 607 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 F9P00740 461 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 IGLV2-11P01706 119 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 IGLV3-25P01717 112 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 IGLV3-27P01718 113 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 MBL2P11226 248 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 KRT3P12035 628 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 SLC2A4P14672 509 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 PDGFRAP16234 1089 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 AMD1P17707 334 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 RRM1P23921 792 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 FCARP24071 287 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CHATP28329 748 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 RYKP34925 604 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CYLC1P35663 651 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 MATKP42679 507 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 MAGEA1P43355 309 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CXCR3P49682 368 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 NR1H2P55055 460 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CDH15P55291 814 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 KRT83P78385 493 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 COG7P83436 770 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 MPP1Q00013 466 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 EIF4EBP2Q13542 120 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 HTR4Q13639 388 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 DHX34Q14147 1143 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 PDGFRLQ15198 375 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 KRTAP27-1Q3LI81 207 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 SLC25A52Q3SY17 297 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CCDC14Q49A88 953 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 C2CD6Q53TS8 623 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 PPP6R3Q5H9R7 873 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 SYPL2Q5VXT5 272 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 TRNP1Q6NT89 227 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 DNAJC24Q6P3W2 148 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 DCUN1D2Q6PH85 259 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 SLC22A25Q6T423 547 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 RAD9BQ6WBX8 426 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 TUBA1AQ71U36 451 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 MTSS1LQ765P7 747 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 TAC4Q86UU9 113 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 ZC3HC1Q86WB0 502 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 DNAAF5Q86Y56 855 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 TMEM139Q8IV31 216 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 LRRC8AQ8IWT6 810 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 UNC45BQ8IWX7 931 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 MUC20Q8N307 709 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 PCYOX1LQ8NBM8 494 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CCDC112Q8NEF3 446 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 JOSD2Q8TAC2 188 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 ZCCHC10Q8TBK6 192 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 DQX1Q8TE96 717 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 RXFP2Q8WXD0 754 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CTNNBL1Q8WYA6 563 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 NT5C3BQ969T7 300 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 AZIN2Q96A70 460 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 SKA1Q96BD8 255 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 FAM149B1Q96BN6 582 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF653Q96CK0 615 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 ZC3HAV1LQ96H79 300 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 PIWIL1Q96J94 861 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 LRRC3BQ96PB8 259 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 SLC22A12Q96S37 553 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 NPY6RQ99463 290 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 PKP4Q99569 1192 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 NCAPGQ9BPX3 1015 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 TUBA1CQ9BQE3 449 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 RPP25Q9BUL9 199 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 PLA2G2FQ9BZM2 168 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 NACA2Q9H009 215 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 PAIP1Q9H074 479 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 THAP2Q9H0W7 228 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 EPHX3Q9H6B9 360 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 KIF9Q9HAQ2 790 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms