RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 PDP1Q9P0J1 537 aaPredicted RBP16.88■□□□□ 0.29
TRAM1-205ENST00000521425 SNX6Q9UNH7 406 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 KLHL20Q9Y2M5 609 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 ORC6Q9Y5N6 252 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 BMP2P12643 396 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 NDUFA5Q16718 116 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 NOXRED1Q6NXP6 359 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 THOC6Q86W42 341 aaKnown RBP16.88■□□□□ 0.29
TRAM1-205ENST00000521425 BPHLQ86WA6 291 aaPredicted RBP16.88■□□□□ 0.29
TRAM1-205ENST00000521425 MEX3DQ86XN8 651 aaKnown RBP16.88■□□□□ 0.29
TRAM1-205ENST00000521425 OR7G1Q8NGA0 311 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 FIBINQ8TAL6 211 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 CAPN10Q9HC96 672 aa16.88■□□□□ 0.29
TRAM1-205ENST00000521425 H3BM21 787 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 GREM1O60565 184 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 MATN1P21941 496 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 SLC19A1P41440 591 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 TMEM115Q12893 351 aaPredicted RBP16.87■□□□□ 0.29
TRAM1-205ENST00000521425 TMEM31Q5JXX7 168 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 SLC22A16Q86VW1 577 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 TMEM132CQ8N3T6 1108 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 ASZ1Q8WWH4 475 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 ALPK1Q96QP1 1244 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 SPHK2Q9NRA0 654 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 PCDHB3Q9Y5E6 796 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 SCN2AQ99250 2005 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 ACOX3O15254 700 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 FADS2O95864 444 aaKnown RBP16.87■□□□□ 0.29
TRAM1-205ENST00000521425 GPIP06744 558 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 CTSLP07711 333 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 CSNK1DP48730 415 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 SEC13P55735 322 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 MSRB3Q8IXL7 192 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 PEX13Q92968 403 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 CIDECQ96AQ7 238 aaPredicted RBP16.87■□□□□ 0.29
TRAM1-205ENST00000521425 REXO5Q96IC2 774 aaKnown RBP16.87■□□□□ 0.29
TRAM1-205ENST00000521425 LRRC3BQ96PB8 259 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 ABCB10Q9NRK6 738 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 COQ3Q9NZJ6 369 aa16.87■□□□□ 0.29
TRAM1-205ENST00000521425 C16orf96A6NNT2 1141 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 TGFBR1P36897 503 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 PRIM2P49643 509 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 INAVAQ3KP66 663 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 PAGE2BQ5JRK9 111 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 NLGN4XQ8N0W4 816 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 ZCCHC7Q8N3Z6 543 aaKnown RBP16.86■□□□□ 0.29
TRAM1-205ENST00000521425 RASGEF1AQ8N9B8 481 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 NPLQ9BXD5 320 aaPredicted RBP16.86■□□□□ 0.29
TRAM1-205ENST00000521425 TRIT1Q9H3H1 467 aaKnown RBP16.86■□□□□ 0.29
TRAM1-205ENST00000521425 XKR8Q9H6D3 395 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 ABCD2Q9UBJ2 740 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 MAGEL2Q9UJ55 1249 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 PNMA8CA0A1B0GUJ8 204 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 PCCBP05166 539 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 CEBPBP17676 345 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 USP39Q53GS9 565 aaKnown RBP16.86■□□□□ 0.29
TRAM1-205ENST00000521425 ALG1LQ6GMV1 187 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 ZNF852Q6ZMS4 543 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 GOLM1Q8NBJ4 401 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 YIPF4Q9BSR8 244 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 SH2B3Q9UQQ2 575 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 FEZF1A0PJY2 475 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 RFXAPO00287 272 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 SLC28A1O00337 649 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 ICMTO60725 284 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 EPHX1P07099 455 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 RAP2AP10114 183 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 RAB15P59190 212 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 DBPQ10586 325 aaPredicted RBP16.86■□□□□ 0.29
TRAM1-205ENST00000521425 SYT16Q17RD7 645 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 GATAD2AQ86YP4 633 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 C8orf59Q8N0T1 100 aaPredicted RBP16.86■□□□□ 0.29
TRAM1-205ENST00000521425 ANKFN1Q8N957 763 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 NEIL2Q969S2 332 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 NXPE3Q969Y0 559 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 NTN4Q9HB63 628 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 PADI4Q9UM07 663 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 CACNA1CQ13936 2221 aa16.86■□□□□ 0.29
TRAM1-205ENST00000521425 CCDC88CQ9P219 2028 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 MAP1BP46821 2468 aaKnown RBP16.85■□□□□ 0.29
TRAM1-205ENST00000521425 OTOL1A6NHN0 477 aaPredicted RBP16.85■□□□□ 0.29
TRAM1-205ENST00000521425 A8MV72 311 aaPredicted RBP16.85■□□□□ 0.29
TRAM1-205ENST00000521425 KLK1P06870 262 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 AOAHP28039 575 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 PSMB5P28074 263 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 PSMD8P48556 350 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 RACK1P63244 317 aaKnown RBP16.85■□□□□ 0.29
TRAM1-205ENST00000521425 FAM109BQ6ICB4 259 aaPredicted RBP16.85■□□□□ 0.29
TRAM1-205ENST00000521425 TNFAIP8L2Q6P589 184 aaPredicted RBP16.85■□□□□ 0.29
TRAM1-205ENST00000521425 KLHL17Q6TDP4 642 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 CEP68Q76N32 757 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 AKAP14Q86UN6 197 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 EID3Q8N140 333 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 KCNC2Q96PR1 638 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 SLC2A11Q9BYW1 496 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 SLC52A3Q9NQ40 469 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 VNN3Q9NY84 501 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 SNX5Q9Y5X3 404 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 VIPP01282 170 aa16.85■□□□□ 0.29
TRAM1-205ENST00000521425 CD22P20273 847 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms