RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	EPHA6	Q9UF33	1036 aa		3.99	□□□□□ -1.77
CTNNA1-222	ENST00000520400	LRRC7	Q96NW7	1537 aa		3.99	□□□□□ -1.77
CTNNA1-222	ENST00000520400	IGSF1	Q8N6C5	1336 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	EEA1	Q15075	1411 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400		A0A0G2JLW4	131 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400		A0A0U1RQK1	487 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400		A0A1W2PR80	420 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ZNF320	A2RRD8	509 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	HHLA1	C9JL84	531 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400		O00370	1275 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	WDR46	O15213	610 aa	Known RBP	3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	PCDH7	O60245	1069 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ZNF821	O75541	412 aa	Predicted RBP	3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	SEC24A	O95486	1093 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	EML2	O95834	649 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	RLN1	P04808	185 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CACNG1	Q06432	222 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	FAM46C	Q5VWP2	391 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CTR9	Q6PD62	1173 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	LEKR1	Q6ZMV7	388 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	GBP6	Q6ZN66	633 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400		Q6ZRP5	223 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400		Q6ZSR9	355 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400		Q6ZTC4	211 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	TDH	Q8IZJ6	230 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	AMER3	Q8N944	861 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	NOA1	Q8NC60	698 aa	Known RBP	3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	SLC37A3	Q8NCC5	494 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	OR7A2P	Q8NGA2	310 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	TSACC	Q96A04	125 aa	Predicted RBP	3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	LRR1	Q96L50	414 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	NECTIN4	Q96NY8	510 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CACNG5	Q9UF02	275 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ITGA11	Q9UKX5	1188 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	NOL7	Q9UMY1	257 aa	Known RBP	3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	KIAA0556	O60303	1618 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	GON4L	Q3T8J9	2241 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	PRX	Q9BXM0	1461 aa		3.98	□□□□□ -1.77
CTNNA1-222	ENST00000520400	TTC37	Q6PGP7	1564 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	TDRD15	B5MCY1	1934 aa	Known RBP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	POGZ	Q7Z3K3	1410 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CCER2	I3L3R5	266 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CAVIN2	O95810	425 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CLDN1	O95832	211 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	KRT2	P35908	639 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	DNA2	P51530	1060 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	OR1D5	P58170	312 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	YWHAH	Q04917	246 aa	Predicted RBP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	TRA2A	Q13595	282 aa	Known RBP eCLIP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	TMEM187	Q14656	261 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	SLMAP	Q14BN4	828 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ZNF74	Q16587	644 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ANKRD20A4	Q4UJ75	823 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ANKRD20A8P	Q5CZ79	823 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ANKRD20A2	Q5SQ80	823 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ANKRD20A1	Q5TYW2	823 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ANKRD20A3	Q5VUR7	823 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	PWWP2B	Q6NUJ5	590 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	PSRC1	Q6PGN9	363 aa	Predicted RBP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ZC3H3	Q8IXZ2	948 aa	Known RBP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	RYBP	Q8N488	228 aa	Predicted RBP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ATAD1	Q8NBU5	361 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	GDAP1	Q8TB36	358 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CENPT	Q96BT3	561 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ZNF486	Q96H40	463 aa	Predicted RBP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	NEDD4L	Q96PU5	975 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CDK19	Q9BWU1	502 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	C5orf66	Q9H5L9	145 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	COPS7B	Q9H9Q2	264 aa	Predicted RBP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	CHST11	Q9NPF2	352 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	PKD2L2	Q9NZM6	624 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	ARMCX3	Q9UH62	379 aa	Predicted RBP	3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	GRID1	Q9ULK0	1009 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	GOLGA3	Q08378	1498 aa		3.97	□□□□□ -1.77
CTNNA1-222	ENST00000520400	LRRIQ1	Q96JM4	1722 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400		A0A087WW49	117 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	TRBV4-1	A0A0J9YWV2	114 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	YDJC	A8MPS7	323 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	RTCA	O00442	366 aa	Known RBP	3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	IFIT3	O14879	490 aa	Known RBP	3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	KLF11	O14901	512 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	CTDSPL	O15194	276 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	ACSL4	O60488	711 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	LUC7L3	O95232	432 aa	Known RBP	3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	ZNF26	P17031	533 aa	Predicted RBP	3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	EPOR	P19235	508 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	SSTR1	P30872	391 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	TCF7	P36402	384 aa	Predicted RBP	3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	TMEM30B	Q3MIR4	351 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	TTC27	Q6P3X3	843 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	HOOK3	Q86VS8	718 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	KLHL7	Q8IXQ5	586 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	RCOR2	Q8IZ40	523 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	SYCP3	Q8IZU3	236 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	MARVELD2	Q8N4S9	558 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	CNBD1	Q8NA66	436 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	OR5AP2	Q8NGF4	316 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	NCOA7	Q8NI08	942 aa		3.96	□□□□□ -1.78
CTNNA1-222	ENST00000520400	SMAP2	Q8WU79	429 aa	Predicted RBP	3.96	□□□□□ -1.78

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