RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 A8MXE2 369 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 PLOD2O00469 737 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 ATP6V0E1O15342 81 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 MGRN1O60291 552 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 PFKFB2O60825 505 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 KINO60870 393 aaKnown RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CIAO1O76071 339 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CLPTM1O96005 669 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 IGHV2-70P01814 119 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 AMBPP02760 352 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 FYNP06241 537 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 RAB40ALP0C0E4 278 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 FRMD6-AS1P0C7T7 363 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 PRSS56P0CW18 603 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CA4P22748 312 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CALRP27797 417 aaKnown RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 ALDH3A2P51648 485 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 HERV-K104P61576 105 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 KCNJ10P78508 379 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 MAT1AQ00266 395 aaKnown RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 ACTN3Q08043 901 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CASP8Q14790 479 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 VWC2Q2TAL6 325 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 MCMDC2Q4G0Z9 681 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 KLHL26Q53HC5 615 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 SYT14P1Q58G82 188 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 DCAF10Q5QP82 559 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 C11orf63Q6NUN7 778 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 RPUSD3Q6P087 351 aaKnown RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 BLOC1S2Q6QNY1 142 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 MFSD6Q6ZSS7 791 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 COPS6Q7L5N1 327 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CHST3Q7LGC8 479 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CENPVQ7Z7K6 275 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 XXYLT1Q8NBI6 393 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 NPEPL1Q8NDH3 523 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 TCP11Q8WWU5 503 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 TMEM143Q96AN5 459 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF653Q96CK0 615 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF501Q96CX3 271 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 LGALS12Q96DT0 336 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 JAKMIP1Q96N16 626 aaKnown RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 LRRC3BQ96PB8 259 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 JPH2Q9BR39 696 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CENPOQ9BU64 300 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 LAT2Q9GZY6 243 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 TNMDQ9H2S6 317 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CNOT10Q9H9A5 744 aaKnown RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 SDR39U1Q9NRG7 319 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 GKN1Q9NS71 199 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 VPS18Q9P253 973 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CFAP45Q9UL16 551 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 GAB2Q9UQC2 676 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 CCL27Q9Y4X3 112 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 BCL9O00512 1426 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 LMO7Q8WWI1 1683 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 FAM208AQ9UK61 1670 aaKnown RBP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 WDR19Q8NEZ3 1342 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 PCDH11YQ9BZA8 1340 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 KDM3BQ7LBC6 1761 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 IGHV4-61A0A0C4DH41 118 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 A0A0D9SFI3 127 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 A0A1W2PPM1 405 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 H0YHG0 523 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 PDLIM1O00151 329 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 DNM1LO00429 736 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 PTGESO14684 152 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 LIN7AO14910 233 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 EIF3HO15372 352 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 GRID2O43424 1007 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 DKC1O60832 514 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 TBX10O75333 385 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 GGPS1O95749 300 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 EML2O95834 649 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 IGHV4-59P01825 116 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 EPB41P11171 864 aaKnown RBP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 TCEA1P23193 301 aaKnown RBP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 CPT2P23786 658 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 CHRNB4P30926 498 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 CEACAM8P31997 349 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 MC5RP33032 325 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 MNAT1P51948 309 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 CCNG1P51959 295 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 HNRNPKP61978 463 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 VSNL1P62760 191 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 SARNPP82979 210 aaKnown RBP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 DMPKQ09013 629 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 XRCC4Q13426 336 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 DRP2Q13474 957 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 RIPK1Q13546 671 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 TUBB2AQ13885 445 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 RBM39Q14498 530 aaKnown RBP2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 CAMK4Q16566 473 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 STX1AQ16623 288 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 TMEM30BQ3MIR4 351 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF876PQ49A33 203 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 MFSD12Q6NUT3 480 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 GBP6Q6ZN66 633 aa2.98□□□□□ -1.93
HMGB1P41-201ENST00000520234 TMPRSS11BQ86T26 416 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms