RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 NDUFA9Q16795 377 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 PHKG1Q16816 387 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 PAQR3Q6TCH7 311 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 MAMDC2Q7Z304 686 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 IGDCC3Q8IVU1 814 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 SIRT6Q8N6T7 355 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 AMER2Q8N7J2 671 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 OR9A4Q8NGU2 314 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 SLCO2A1Q92959 643 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 CCDC138Q96M89 665 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 VN1R1Q9GZP7 353 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 PARVBQ9HBI1 364 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 PLAC1Q9HBJ0 212 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 TAS2R13Q9NYV9 303 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 PTGFRNQ9P2B2 879 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 ASIC3Q9UHC3 531 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 MKL2Q9ULH7 1088 aa12.32□□□□□ -0.44
HMGCS1-205ENST00000508319 CACNA1DQ01668 2161 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 FEZF1A0PJY2 475 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 H0YIG0 161 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 JRKO75564 520 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 BMP10O95393 424 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 C8orf89P0DMQ9 161 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 ITGAMP11215 1152 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 EDN3P14138 238 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 IL1RNP18510 177 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 IVDP26440 423 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 BCL6P41182 706 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 AVPR1BP47901 424 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 RGS4P49798 205 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 TNFSF10P50591 281 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 ARG2P78540 354 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 ZXDCQ2QGD7 858 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 SPANXN3Q5MJ09 141 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 TMEM214Q6NUQ4 689 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 UGT3A1Q6NUS8 523 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 RPUSD3Q6P087 351 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 AGTRAPQ6RW13 159 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 RIPOR1Q6ZS17 1223 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 KIAA0408Q6ZU52 694 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 GALNT7Q86SF2 657 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 C17orf64Q86WR6 236 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 MYO1HQ8N1T3 1032 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 OR1N1Q8NGS0 311 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 MCOLN3Q8TDD5 553 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 CERS2Q96G23 380 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 MACROD1Q9BQ69 325 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 WDR83Q9BRX9 315 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 SGPP1Q9BX95 441 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 ZNF700Q9H0M5 742 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 PCBD2Q9H0N5 130 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 ATG10Q9H0Y0 220 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 PLA2G3Q9NZ20 509 aa12.31□□□□□ -0.44
HMGCS1-205ENST00000508319 ABCA12Q86UK0 2595 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 CSMD1Q96PZ7 3565 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 DYTNA2CJ06 578 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 SLC16A5O15375 505 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 AHSGP02765 367 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 CYC1P08574 325 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 CDH1P12830 882 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 COL8A1P27658 744 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 XCR1P46094 333 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 TDGF1P3P51864 188 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 PGGT1BP53609 377 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 NAE1Q13564 534 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 BBS9Q3SYG4 887 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 FAM180AQ6UWF9 173 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 LANCL3Q6ZV70 420 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 PDSS2Q86YH6 399 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 BCORP1Q8N888 145 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 KCT2Q8NC54 265 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 OR51Q1Q8NH59 317 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 HAS2Q92819 552 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 TM4SF19Q96DZ7 209 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 THAP11Q96EK4 314 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 LINGO1Q96FE5 620 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 IMMP1LQ96LU5 166 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 TAAR6Q96RI8 345 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 NAT9Q9BTE0 207 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 TUBB6Q9BUF5 446 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 KCNF1Q9H3M0 494 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 OLAHQ9NV23 265 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 HCN3Q9P1Z3 774 aa12.3□□□□□ -0.44
HMGCS1-205ENST00000508319 TRAV17A0A0B4J275 112 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 IGHV3-20A0A0C4DH32 117 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 SGK494L7N484 410 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 LCMT2O60294 686 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 SEC24DO94855 1032 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 WDPCPO95876 746 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 F10P00742 488 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 CCND1P24385 295 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 INAQ16352 499 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 MINDY4Q4G0A6 757 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 ZNF324BQ6AW86 544 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 ZNF787Q6DD87 383 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 CAPN13Q6MZZ7 669 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 LCTLQ6UWM7 567 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 PCGF5Q86SE9 256 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 ASPGQ86U10 573 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 SLC26A11Q86WA9 606 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms