RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 FAM216AQ8WUB2 273 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 EEF2KMTQ96G04 330 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 PDLIM5Q96HC4 596 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 ASB16Q96NS5 453 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 SLC38A3Q99624 504 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 MAP3K3Q99759 626 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 FAM83CQ9BQN1 747 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 MARVELD1Q9BSK0 173 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 BEX2Q9BXY8 128 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 SLC6A16Q9GZN6 736 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 NT5DC2Q9H857 520 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 MPP6Q9NZW5 540 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 GHRLQ9UBU3 117 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 EIF2B4Q9UI10 523 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 NUDT5Q9UKK9 219 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 USP18Q9UMW8 372 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 CA5BQ9Y2D0 317 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 RICTORQ6R327 1708 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 CNTNAP5Q8WYK1 1306 aa10.49□□□□□ -0.73
PDLIM5-210ENST00000508216 TOGARAM1Q9Y4F4 1720 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 DHRS12A0PJE2 317 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 POM121BA6NF01 834 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 M0QZK8 103 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PDCD5O14737 125 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 HPGDSO60760 199 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 NBNO60934 754 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 H2AFYO75367 372 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 ZMPSTE24O75844 475 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PRSS23O95084 383 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 MPC2O95563 127 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 GSRP00390 522 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 SPP1P10451 314 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 ANXA7P20073 488 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PVALBP20472 110 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PRPS1L1P21108 318 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 C5AR1P21730 350 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 DNASE1P24855 282 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 MAPK4P31152 587 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PTGFRP43088 359 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 LHX1P48742 406 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 HNMTP50135 292 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 ATXN3P54252 364 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 HUNKP57058 714 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 SLC10A2Q12908 348 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PEX6Q13608 980 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 ZNHIT3Q15649 155 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 TRIM60Q495X7 471 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 SV2CQ496J9 727 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 TMEM67Q5HYA8 995 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 C9orf152Q5JTZ5 239 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 CDC73Q6P1J9 531 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 TMEM132CQ8N3T6 1108 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 OR52N2Q8NGI0 321 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 CANT1Q8WVQ1 401 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 BRI3BPQ8WY22 251 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 OTUB2Q96DC9 234 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 SHISA4Q96DD7 197 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 KAZALD1Q96I82 304 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 FAM71F1Q96KD3 344 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 FAM84AQ96KN4 292 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 MARK4Q96L34 752 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PRMT6Q96LA8 375 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 ZNF599Q96NL3 588 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 ACO2Q99798 780 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 CRB3Q9BUF7 120 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 MECRQ9BV79 373 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 TMED9Q9BVK6 235 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 FTHL17Q9BXU8 183 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 AP5M1Q9H0R1 490 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 SLC28A3Q9HAS3 691 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 MRPL47Q9HD33 250 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PRDM7Q9NQW5 492 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 TEX10Q9NXF1 929 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 SEC14L3Q9UDX4 400 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PCDHGC4Q9Y5F7 938 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PCDHGA6Q9Y5G7 932 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PCDHGA5Q9Y5G8 931 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 PCDHGA1Q9Y5H4 931 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 ROBO3Q96MS0 1386 aa10.48□□□□□ -0.73
PDLIM5-210ENST00000508216 DLEC1Q9Y238 1755 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 A0A1B0GVI7 797 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 A0A1B0GW55 424 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 A0A1W2PN81 502 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 TCAF2A6NFQ2 919 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 MCIDASD6RGH6 385 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 NPIPB8E9PQR5 432 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 UBE2Q2LH0YL09 131 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 MASP2O00187 686 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 CBX4O00257 560 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 CHP2O43745 196 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 SDC3O75056 442 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 ERN1O75460 977 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 PCCAP05165 728 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 DUX4L2P0CJ85 424 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 DUX4L3P0CJ86 424 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 DUX4L4P0CJ87 422 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 DUX4L5P0CJ88 424 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 DUX4L6P0CJ89 424 aa10.47□□□□□ -0.73
PDLIM5-210ENST00000508216 DUX4L7P0CJ90 424 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms