RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 KCNJ11Q14654 390 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 NDUFA9Q16795 377 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 MEP1AQ16819 746 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 KLHL38Q2WGJ6 581 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 KRTAP21-3Q3LHN1 58 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 MEX3BQ6ZN04 569 aaKnown RBP13.86□□□□□ -0.19
TRAF4-212ENST00000498540 GALNTL5Q7Z4T8 443 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 SPNS2Q8IVW8 549 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 OR51Q1Q8NH59 317 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 ZNF480Q8WV37 535 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 UTP6Q9NYH9 597 aaKnown RBP13.86□□□□□ -0.19
TRAF4-212ENST00000498540 C19orf25Q9UFG5 118 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-212ENST00000498540 NEU2Q9Y3R4 380 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 GABRR3A8MPY1 467 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 MIF4GDA9UHW6 222 aaKnown RBP13.85□□□□□ -0.19
TRAF4-212ENST00000498540 E7ENX8 843 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 H0YIG0 161 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 SMAPO00193 183 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 DIAPH2O60879 1101 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 NEURL1O76050 574 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 NSA2O95478 260 aaKnown RBP13.85□□□□□ -0.19
TRAF4-212ENST00000498540 CYC1P08574 325 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 CD46P15529 392 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 IL1RNP18510 177 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 TAP2Q03519 686 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 RELAQ04206 551 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 TYSND1Q2T9J0 566 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 RNFT1Q5M7Z0 435 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 CES3Q6UWW8 571 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 RAD9BQ6WBX8 426 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 VN1R4Q7Z5H5 301 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 FGD2Q7Z6J4 655 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-212ENST00000498540 DOLPP1Q86YN1 238 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 TMEM178AQ8NBL3 297 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 PHF10Q8WUB8 498 aaKnown RBP13.85□□□□□ -0.19
TRAF4-212ENST00000498540 MFSD3Q96ES6 412 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 DMRTA2Q96SC8 542 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 TREX2Q9BQ50 279 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-212ENST00000498540 MACROD1Q9BQ69 325 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 TSPY26PQ9H489 355 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 MMP25Q9NPA2 562 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 FAM114A2Q9NRY5 505 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 ZNF148Q9UQR1 794 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 CRYL1Q9Y2S2 319 aa13.85□□□□□ -0.19
TRAF4-212ENST00000498540 H7BY64 318 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 SGK494L7N484 410 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 VAPBO95292 243 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 IPO7O95373 1038 aaKnown RBP13.84□□□□□ -0.19
TRAF4-212ENST00000498540 CATP04040 527 aaKnown RBP13.84□□□□□ -0.19
TRAF4-212ENST00000498540 SP1P08047 785 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 ZSCAN5DPP0CG00 497 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 CHRM3P20309 590 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 ABATP80404 500 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 OC90Q02509 493 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-212ENST00000498540 SNX1Q13596 522 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 PTK6Q13882 451 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 EXT1Q16394 746 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 SFT2D3Q587I9 215 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 ZNF468Q5VIY5 522 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-212ENST00000498540 PAPD4Q6PIY7 484 aaKnown RBP13.84□□□□□ -0.19
TRAF4-212ENST00000498540 LRRC56Q8IYG6 542 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-212ENST00000498540 GHDCQ8N2G8 530 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 M1APQ8TC57 530 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 CA5BP1Q8WTZ4 195 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 C1orf54Q8WWF1 131 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 SDCCAG3Q96C92 435 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 POM121Q96HA1 1249 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 PRAP1Q96NZ9 151 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 SLC30A3Q99726 388 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 RBCK1Q9BYM8 510 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 PPT2Q9UMR5 302 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 ASB1Q9Y576 335 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 HCFC1P51610 2035 aa13.84□□□□□ -0.19
TRAF4-212ENST00000498540 ZNF839A8K0R7 811 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 E9PLN8 166 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 H3BMM5 538 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 CDC123O75794 336 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-212ENST00000498540 TSPAN12O95859 305 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 ESR1P03372 595 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 ZNF24P17028 368 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 HSD17B2P37059 387 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 BCL6P41182 706 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 AGTR2P50052 363 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 RNF187Q5TA31 235 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-212ENST00000498540 THEMIS2Q5TEJ8 643 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 SLC25A25Q6KCM7 469 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 MRNIPQ6NTE8 343 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 TMEM214Q6NUQ4 689 aaKnown RBP13.83□□□□□ -0.2
TRAF4-212ENST00000498540 PDSS2Q86YH6 399 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 REXO1L1PQ8IX06 675 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 CPSF7Q8N684 471 aaKnown RBP13.83□□□□□ -0.2
TRAF4-212ENST00000498540 SLC5A8Q8N695 610 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 CCDC89Q8N998 374 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 FAM98AQ8NCA5 519 aaKnown RBP13.83□□□□□ -0.2
TRAF4-212ENST00000498540 GIMAP7Q8NHV1 300 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 ZCCHC10Q8TBK6 192 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 TSLPQ969D9 159 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 HES6Q96HZ4 224 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 CCDC138Q96M89 665 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms