RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 OR4F21O95013 312 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 TGDSO95455 350 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 CHEK2O96017 543 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 SERPINA6P08185 405 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 ARRB2P32121 409 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 CSTF2P33240 577 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 ARL4DP49703 201 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 RPL14P50914 215 aaKnown RBP18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 YBX1P67809 324 aaKnown RBP18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 PUM1Q14671 1186 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 CES4AQ5XG92 561 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 KANK2Q63ZY3 851 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 NIPAL1Q6NVV3 410 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 TRIM73Q86UV7 250 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 METTL6Q8TCB7 284 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 SIKE1Q9BRV8 207 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 SIDT1Q9NXL6 827 aaKnown RBP18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 VTI1BQ9UEU0 232 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 CEP250Q9BV73 2442 aa18.9■□□□□ 0.62
SCAMP3-209ENST00000497470 FITM1A5D6W6 292 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 ANKDD1BA6NHY2 528 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 ITM2AO43736 263 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 ULK1O75385 1050 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 CHRNGP07510 517 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 PVRP15151 417 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 PCSK2P16519 638 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 VARSP26640 1264 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 CSTF3Q12996 717 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 IFT88Q13099 833 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 ZRSR2Q15696 482 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 UGT3A2Q3SY77 523 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 GARNL3Q5VVW2 1013 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 RPS27LQ71UM5 84 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 TRIM46Q7Z4K8 759 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 ADCK2Q7Z695 626 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 CRLF3Q8IUI8 442 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 MCATQ8IVS2 390 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 CAMKVQ8NCB2 501 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 PIWIL2Q8TC59 973 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 NT5CQ8TCD5 201 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 PPM1MQ96MI6 270 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 NLNQ9BYT8 704 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 C20orf27Q9GZN8 174 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 FANCEQ9HB96 536 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 FAM60AQ9NP50 221 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 ABCF3Q9NUQ8 709 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 NMRK1Q9NWW6 199 aa18.89■□□□□ 0.61
SCAMP3-209ENST00000497470 DNAH14Q0VDD8 3507 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 SNRNP200O75643 2136 aaKnown RBP18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 SPAARA0A1B0GVQ0 90 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 URADA6NGE7 173 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 HAT1O14929 419 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 OR1F1O43749 312 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 CAPN1P07384 714 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 HMOX2P30519 316 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 TSFMP43897 325 aaKnown RBP18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 MC2RQ01718 297 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 CUL3Q13618 768 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 CPSF6Q16630 551 aaKnown RBP eCLIP18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 ADPRMQ3LIE5 342 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 TMEM35AQ53FP2 167 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 HES3Q5TGS1 186 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 TLDC1Q6P9B6 456 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 DHRS13Q6UX07 377 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 TMPRSS7Q7RTY8 843 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 SRFBP1Q8NEF9 429 aaKnown RBP18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 ZNF473Q8WTR7 871 aaKnown RBP18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 RERGQ96A58 199 aaPredicted RBP18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 MOCOSQ96EN8 888 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 ZPBPQ9BS86 351 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 ELOVL6Q9H5J4 265 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 CLK4Q9HAZ1 481 aaKnown RBP18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 SOHLH2Q9NX45 425 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 ZDHHC2Q9UIJ5 367 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 SERTAD3Q9UJW9 196 aa18.88■□□□□ 0.61
SCAMP3-209ENST00000497470 CCDC187A0A096LP49 1063 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 A0A1B0GTL3 188 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 H3BMH7 237 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 MANBAO00462 879 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 LCMT2O60294 686 aaKnown RBP18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 EDF1O60869 148 aaKnown RBP18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 SEMA3DO95025 777 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 SLC35G6P0C7Q6 338 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 FGF5P12034 268 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 TSPAN8P19075 237 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 PRPH2P23942 346 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 PTX3P26022 381 aaPredicted RBP18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 ARL1P40616 181 aaPredicted RBP18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 BCL6P41182 706 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 RAB15P59190 212 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 GUCY1A3Q02108 690 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 PRTGQ2VWP7 1150 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 SH2D4BQ5SQS7 431 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 PHF19Q5T6S3 580 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 IGF2-ASQ6U949 168 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 ATG14Q6ZNE5 492 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 ASPGQ86U10 573 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 WDR75Q8IWA0 830 aaKnown RBP18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 FAM20CQ8IXL6 584 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 CDYL2Q8N8U2 506 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms