RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 CDC14AQ9UNH5 594 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 WBP11Q9Y2W2 641 aaKnown RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 NAALAD2Q9Y3Q0 740 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 PCDHGB3Q9Y5G1 929 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 MAGED1Q9Y5V3 778 aaPredicted RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 GABRR3A8MPY1 467 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 SUV39H1O43463 412 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 PI15O43692 258 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 RFPL2O75678 378 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 C1orf105O95561 183 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 SEMG1P04279 462 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 C1GALT1C1LP0DN25 315 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 LAMP1P11279 417 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 PCGF2P35227 344 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 PIK3CBP42338 1070 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 IST1P53990 364 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 ITGA1P56199 1179 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 CD47Q08722 323 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 RPA4Q13156 261 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 FADDQ13158 208 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 ZNF829Q3KNS6 432 aaPredicted RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 KDM4DQ6B0I6 523 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 PDE12Q6L8Q7 609 aaKnown RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 LINC00299Q6ZSB3 139 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 IKBIPQ70UQ0 350 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 PARS2Q7L3T8 475 aaKnown RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 DSG4Q86SJ6 1040 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 TSPYL5Q86VY4 417 aaPredicted RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 SLC30A8Q8IWU4 369 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 SYTL1Q8IYJ3 562 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 OR9A1PQ8NGU1 263 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 POF1BQ8WVV4 589 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 NUS1Q96E22 293 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 PAWRQ96IZ0 340 aaKnown RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 OR4K3Q96R72 315 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 ZNF347Q96SE7 839 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 SGPP1Q9BX95 441 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 REEP4Q9H6H4 257 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 TRIM39Q9HCM9 518 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 PALMDQ9NP74 551 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 DYRK4Q9NR20 520 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 AHSPQ9NZD4 102 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 KIF17Q9P2E2 1029 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 TMEFF2Q9UIK5 374 aaPredicted RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 FZD4Q9ULV1 537 aa9.31□□□□□ -0.92
NPHP3-209ENST00000493732 MRPS23Q9Y3D9 190 aaKnown RBP9.31□□□□□ -0.92
NPHP3-209ENST00000493732 KLHL33A6NCF5 533 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 TMEM202A6NGA9 273 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 MYO1GB0I1T2 1018 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 SLC1A7O00341 560 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 NPC1O15118 1278 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 PCDH7O60245 1069 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 NFATC1O95644 943 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 BCL10O95999 233 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 RPN2P04844 631 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 CYP17A1P05093 508 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 ITGA2P17301 1181 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 JUNDP17535 347 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 IDSP22304 550 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 HSD17B2P37059 387 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 GPR1P46091 355 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 BDKRB1P46663 353 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 YAP1P46937 504 aaKnown RBP9.3□□□□□ -0.92
NPHP3-209ENST00000493732 PREPP48147 710 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 MVKQ03426 396 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 CDK5R2Q13319 367 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 ELAVL3Q14576 367 aaKnown RBP9.3□□□□□ -0.92
NPHP3-209ENST00000493732 RGNQ15493 299 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 MOGQ16653 247 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 MEP1AQ16819 746 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 TRIM40Q6P9F5 258 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 PTOV1Q86YD1 416 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 CFAP206Q8IYR0 622 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 SVOPQ8N4V2 548 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 CDC26Q8NHZ8 85 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 PHOSPHO2Q8TCD6 241 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 SPPL3Q8TCT6 385 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 ZFP90Q8TF47 636 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 ZNF480Q8WV37 535 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 IPCEF1Q8WWN9 437 aaPredicted RBP9.3□□□□□ -0.92
NPHP3-209ENST00000493732 SORCS1Q8WY21 1168 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 BORCS5Q969J3 196 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 RAB7BQ96AH8 199 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 SH3KBP1Q96B97 665 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 EPYCQ99645 322 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 LIN28AQ9H9Z2 209 aaKnown RBP9.3□□□□□ -0.92
NPHP3-209ENST00000493732 TBC1D23Q9NUY8 699 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 FAM8A1Q9UBU6 413 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 PADI2Q9Y2J8 665 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 SAMHD1Q9Y3Z3 626 aaKnown RBP9.3□□□□□ -0.92
NPHP3-209ENST00000493732 U3KQV3 271 aa9.3□□□□□ -0.92
NPHP3-209ENST00000493732 C1orf226A1L170 272 aa9.29□□□□□ -0.92
NPHP3-209ENST00000493732 ADAMDEC1O15204 470 aa9.29□□□□□ -0.92
NPHP3-209ENST00000493732 LZTS3O60299 673 aaPredicted RBP9.29□□□□□ -0.92
NPHP3-209ENST00000493732 ATE1O95260 518 aa9.29□□□□□ -0.92
NPHP3-209ENST00000493732 ANGPTL1O95841 491 aa9.29□□□□□ -0.92
NPHP3-209ENST00000493732 C9P02748 559 aa9.29□□□□□ -0.92
NPHP3-209ENST00000493732 NPPBP16860 134 aa9.29□□□□□ -0.92
NPHP3-209ENST00000493732 CXCR2P25025 360 aa9.29□□□□□ -0.92
NPHP3-209ENST00000493732 SERPINB1P30740 379 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms