RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	HEATR5B	Q9P2D3	2071 aa		12.92	□□□□□ -0.34
SAMM50-204	ENST00000493161	MED13L	Q71F56	2210 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	ASPDH	A6ND91	283 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	SGK494	L7N484	410 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	SMAP	O00193	183 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	ADAM10	O14672	748 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	ASNA1	O43681	348 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	PKM	P14618	531 aa	Known RBP	12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	IL1RN	P18510	177 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	MGAT1	P26572	445 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	EEF1D	P29692	281 aa	Known RBP	12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	XCR1	P46094	333 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	AVPR1B	P47901	424 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	RELA	Q04206	551 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	TLE4	Q04727	773 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	ARHGAP19	Q14CB8	494 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	TYSND1	Q2T9J0	566 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	KRTCAP3	Q53RY4	240 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	SPNS3	Q6ZMD2	512 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	GALNTL5	Q7Z4T8	443 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	CDH24	Q86UP0	819 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	PDSS2	Q86YH6	399 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	DOLPP1	Q86YN1	238 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	REXO1L1P	Q8IX06	675 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	ACBD4	Q8NC06	268 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	GIMAP7	Q8NHV1	300 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	C14orf79	Q96F83	325 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	UTP23	Q9BRU9	249 aa	Known RBP	12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	SYBU	Q9NX95	663 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	NEU2	Q9Y3R4	380 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	PCDHGB6	Q9Y5F9	930 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	CAPN6	Q9Y6Q1	641 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	SCN2A	Q99250	2005 aa		12.91	□□□□□ -0.34
SAMM50-204	ENST00000493161	GABRR3	A8MPY1	467 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	TXNDC9	O14530	226 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	NEURL1	O76050	574 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	IPO7	O95373	1038 aa	Known RBP	12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	NSA2	O95478	260 aa	Known RBP	12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	SYF2	O95926	243 aa	Known RBP	12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	CLCN7	P51798	805 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	CSNK1G2	P78368	415 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	CUL1	Q13616	776 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	NDUFA9	Q16795	377 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	MEP1A	Q16819	746 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	CENPU	Q71F23	418 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	KIAA1328	Q86T90	577 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	DMRTA2	Q96SC8	542 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	SPOCK3	Q9BQ16	436 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	KIFC1	Q9BW19	673 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	RBCK1	Q9BYM8	510 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	IL22	Q9GZX6	179 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	ENKD1	Q9H0I2	346 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	GPAM	Q9HCL2	828 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	FAM114A2	Q9NRY5	505 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	PAK5	Q9P286	719 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	SH2B3	Q9UQQ2	575 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	ASB1	Q9Y576	335 aa		12.9	□□□□□ -0.34
SAMM50-204	ENST00000493161	CACNA1C	Q13936	2221 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	ZFHX3	Q15911	3703 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	TCRBV7S3A2	A0A539	114 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161		H0YIG0	161 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	DIAPH2	O60879	1101 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	DNAJB6	O75190	326 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	RDH16	O75452	317 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	CDC123	O75794	336 aa	Predicted RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	CCNDBP1	O95273	360 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	ESR1	P03372	595 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	CAT	P04040	527 aa	Known RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	SP1	P08047	785 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	ABO	P16442	354 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	CAPN3	P20807	821 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	BCL6	P41182	706 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	NPY2R	P49146	381 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	ABAT	P80404	500 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	RHAG	Q02094	409 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	OC90	Q02509	493 aa	Predicted RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	PTK6	Q13882	451 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	SFT2D3	Q587I9	215 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	THEMIS2	Q5TEJ8	643 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	MRNIP	Q6NTE8	343 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	TMEM214	Q6NUQ4	689 aa	Known RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	PAPD4	Q6PIY7	484 aa	Known RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	MEX3B	Q6ZN04	569 aa	Known RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	SYCE1	Q8N0S2	351 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	KIF2B	Q8N4N8	673 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	CCDC89	Q8N998	374 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	KCT2	Q8NC54	265 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	ZCCHC10	Q8TBK6	192 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	M1AP	Q8TC57	530 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	TSLP	Q969D9	159 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	DESI2	Q9BSY9	194 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	CDCP1	Q9H5V8	836 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	MCCC2	Q9HCC0	563 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	MMP25	Q9NPA2	562 aa		12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	EIF2B3	Q9NR50	452 aa	Known RBP	12.89	□□□□□ -0.35
SAMM50-204	ENST00000493161	UTP6	Q9NYH9	597 aa	Known RBP	12.89	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms