RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 SP140Q13342 867 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 PCOLCEQ15113 449 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 RBM20Q5T481 1227 aaKnown RBP17.41■□□□□ 0.38
SMIM4-205ENST00000491607 PAQR3Q6TCH7 311 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 RIPOR1Q6ZS17 1223 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 PCGF5Q86SE9 256 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 C17orf64Q86WR6 236 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 BCORP1Q8N888 145 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 ZCCHC10Q8TBK6 192 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 HIST1H2AHQ96KK5 128 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 HIST1H2AJQ99878 128 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 H2AFJQ9BTM1 129 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMIM4-205ENST00000491607 DDX47Q9H0S4 455 aaKnown RBP17.41■□□□□ 0.38
SMIM4-205ENST00000491607 OLAHQ9NV23 265 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 HCN3Q9P1Z3 774 aa17.41■□□□□ 0.38
SMIM4-205ENST00000491607 RP1L1Q8IWN7 2480 aaPredicted RBP17.4■□□□□ 0.38
SMIM4-205ENST00000491607 LOC102723996A0A087X1L8 192 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 TRAV17A0A0B4J275 112 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 LRRTM2O43300 516 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 ZSCAN12O43309 604 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 NSA2O95478 260 aaKnown RBP17.4■□□□□ 0.38
SMIM4-205ENST00000491607 ITGAMP11215 1152 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 CDH1P12830 882 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 ICAM2P13598 275 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 CCND1P24385 295 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 GABRB3P28472 473 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 GRK3P35626 688 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 TNFSF10P50591 281 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 EFNA3P52797 238 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 AP2B1P63010 937 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 NAE1Q13564 534 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 BBS9Q3SYG4 887 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 MSS51Q4VC12 460 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 ZNF787Q6DD87 383 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 TMEM214Q6NUQ4 689 aaKnown RBP17.4■□□□□ 0.38
SMIM4-205ENST00000491607 RPUSD3Q6P087 351 aaKnown RBP17.4■□□□□ 0.38
SMIM4-205ENST00000491607 TMEM205Q6UW68 189 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 AMER2Q8N7J2 671 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 CAMKVQ8NCB2 501 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 OR51Q1Q8NH59 317 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 THAP11Q96EK4 314 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 CERS2Q96G23 380 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 TUBB6Q9BUF5 446 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 VN1R1Q9GZP7 353 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 ANKHQ9HCJ1 492 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 SLC17A6Q9P2U8 582 aa17.4■□□□□ 0.38
SMIM4-205ENST00000491607 SPTAN1Q13813 2472 aaKnown RBP17.39■□□□□ 0.37
SMIM4-205ENST00000491607 IGHV3-20A0A0C4DH32 117 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 SGK494L7N484 410 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 CES2O00748 559 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 SLC16A5O15375 505 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 SEC24DO94855 1032 aaPredicted RBP17.39■□□□□ 0.37
SMIM4-205ENST00000491607 AHSGP02765 367 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 BCL6P41182 706 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 XCR1P46094 333 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 ZNF33BQ06732 778 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 PDAP1Q13442 181 aaKnown RBP17.39■□□□□ 0.37
SMIM4-205ENST00000491607 PHKG1Q16816 387 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 HP1BP3Q5SSJ5 553 aaPredicted RBP17.39■□□□□ 0.37
SMIM4-205ENST00000491607 ABHD17BQ5VST6 288 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 HIBCHQ6NVY1 386 aaPredicted RBP17.39■□□□□ 0.37
SMIM4-205ENST00000491607 LANCL3Q6ZV70 420 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 ASPGQ86U10 573 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 SHISA5Q8N114 240 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 GPATCH11Q8N954 259 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 KCT2Q8NC54 265 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 HAS2Q92819 552 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 SLX1AQ9BQ83 275 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 NAT9Q9BTE0 207 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 TRMT1Q9NXH9 659 aaKnown RBP17.39■□□□□ 0.37
SMIM4-205ENST00000491607 ARL15Q9NXU5 204 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 C19orf25Q9UFG5 118 aaPredicted RBP17.39■□□□□ 0.37
SMIM4-205ENST00000491607 DOCK10Q96BY6 2186 aa17.39■□□□□ 0.37
SMIM4-205ENST00000491607 ICE1Q9Y2F5 2266 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 WDPCPO95876 746 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 SLC35G6P0C7Q6 338 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 PER3P56645 1201 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 IL2P60568 153 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 CAPN13Q6MZZ7 669 aaPredicted RBP17.38■□□□□ 0.37
SMIM4-205ENST00000491607 LCTLQ6UWM7 567 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 KIAA0408Q6ZU52 694 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 CPEB2Q7Z5Q1 589 aaKnown RBP17.38■□□□□ 0.37
SMIM4-205ENST00000491607 SLC26A11Q86WA9 606 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 IGDCC3Q8IVU1 814 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 CNTN4Q8IWV2 1026 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 SUN3Q8TAQ9 357 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 SLC13A3Q8WWT9 602 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 PYCR2Q96C36 320 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 CFAP36Q96G28 342 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 IMMP1LQ96LU5 166 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 CYTH2Q99418 400 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 SGPP1Q9BX95 441 aa17.38■□□□□ 0.37
SMIM4-205ENST00000491607 OR2W5A6NFC9 320 aa17.37■□□□□ 0.37
SMIM4-205ENST00000491607 A8MUI8 341 aa17.37■□□□□ 0.37
SMIM4-205ENST00000491607 LCMT2O60294 686 aaKnown RBP17.37■□□□□ 0.37
SMIM4-205ENST00000491607 RDH16O75452 317 aa17.37■□□□□ 0.37
SMIM4-205ENST00000491607 NPPBP16860 134 aa17.37■□□□□ 0.37
SMIM4-205ENST00000491607 DCTP40126 519 aa17.37■□□□□ 0.37
SMIM4-205ENST00000491607 PGGT1BP53609 377 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms